[←][→] ath   At3g13460 Gene
functional annotation
Function   evolutionarily conserved C-terminal region 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  HDA IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001030689.1  NP_001030690.1  NP_187955.2  NP_850578.1 
BLAST NP_001030689.1  NP_001030690.1  NP_187955.2  NP_850578.1 
Orthologous [Ortholog page] ECT4 (ath)  LOC4331683 (osa)  LOC4334103 (osa)  LOC7457687 (ppo)  LOC7463565 (ppo)  LOC11413827 (mtr)  LOC100807919 (gma)  LOC100819200 (gma)  LOC101253713 (sly)  LOC103849773 (bra)  LOC103859518 (bra)  LOC103870130 (bra)  LOC123084881 (tae)  LOC123093206 (tae)  LOC123098474 (tae)  LOC123105013 (tae)  LOC123113306 (tae)  LOC123122818 (tae)  LOC123449490 (hvu)  LOC123452218 (hvu) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001030689.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001030690.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_187955.2)
nucl 7,  cyto 2  (predict for NP_850578.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001030689.1)
other 8  (predict for NP_001030690.1)
other 8  (predict for NP_187955.2)
other 7  (predict for NP_850578.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with ECT2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.3 TIM17-2 translocase inner membrane subunit 17-2 [detail] 818317
9.7 AT3G07660 flocculation protein (DUF1296) [detail] 819957
9.0 ATRBP45C RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 828808
8.5 NMD3 nonsense-mediated mRNA decay NMD3 family protein [detail] 814908
6.8 PP5.2 protein phosphatase 5.2 [detail] 818881
6.8 U2AF35B Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 834293
6.3 CSR1 chlorsulfuron/imidazolinone resistant 1 [detail] 824015
5.7 AT1G27090 glycine-rich protein [detail] 839598
Coexpressed
gene list		 [Coexpressed gene list for ECT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256982_at
256982_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256982_at
256982_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256982_at
256982_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820548      
Refseq ID (protein) NP_001030689.1 
NP_001030690.1 
NP_187955.2 
NP_850578.1 


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