[←][→] ath   At3g13740 Gene
functional annotation
Function   Ribonuclease III family protein      
GO BP
GO:0000476 [list] [network] maturation of 4.5S rRNA  (2 genes)  IGI  
GO:0000967 [list] [network] rRNA 5'-end processing  (4 genes)  IGI  
GO:0034470 [list] [network] ncRNA processing  (276 genes)  IGI  
GO:0006396 [list] [network] RNA processing  (567 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (4 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001319543.1  NP_001325426.1  NP_001325427.1  NP_001325428.1  NP_001325429.1  NP_566463.1 
BLAST NP_001319543.1  NP_001325426.1  NP_001325427.1  NP_001325428.1  NP_001325429.1  NP_566463.1 
Orthologous [Ortholog page] AT1G55140 (ath)  LOC4338401 (osa)  LOC4350155 (osa)  LOC7480055 (ppo)  LOC11421489 (mtr)  LOC100527214 (gma)  LOC101268172 (sly)  LOC103832611 (bra)  LOC103870100 (bra)  LOC107279353 (osa)  LOC123060343 (tae)  LOC123068872 (tae)  LOC123077399 (tae)  LOC123442874 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  chlo 1,  cyto 1,  cyto_E.R. 1  (predict for NP_001319543.1)
chlo 6,  mito 1,  cyto_nucl 1,  nucl 1,  cyto 1  (predict for NP_001325426.1)
chlo 7,  vacu 1,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for NP_001325427.1)
chlo 6,  vacu 1,  nucl 1,  cyto_nucl 1,  mito 1,  extr 1,  E.R._vacu 1  (predict for NP_001325428.1)
chlo 9,  mito 1  (predict for NP_001325429.1)
chlo 7,  mito 1,  nucl 1,  cyto_nucl 1  (predict for NP_566463.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319543.1)
chlo 7  (predict for NP_001325426.1)
chlo 7  (predict for NP_001325427.1)
chlo 7  (predict for NP_001325428.1)
chlo 7  (predict for NP_001325429.1)
chlo 7  (predict for NP_566463.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G13740 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.6 PDE318 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 844416
6.3 AT5G38290 Peptidyl-tRNA hydrolase family protein [detail] 833811
6.2 AT3G23700 Nucleic acid-binding proteins superfamily [detail] 821951
Coexpressed
gene list		 [Coexpressed gene list for AT3G13740]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256786_at
256786_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256786_at
256786_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256786_at
256786_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820583      
Refseq ID (protein) NP_001319543.1 
NP_001325426.1 
NP_001325427.1 
NP_001325428.1 
NP_001325429.1 
NP_566463.1 


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