[←][→] ath   AT3G13740 Gene
functional annotation
Function   Ribonuclease III family protein  
GO BP
GO:0000476 [list] [network] maturation of 4.5S rRNA  (2 genes)  IGI  
GO:0000967 [list] [network] rRNA 5'-end processing  (7 genes)  IGI  
GO:0034470 [list] [network] ncRNA processing  (380 genes)  IGI  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (10 genes)  IEA  
KEGG
Protein NP_001319543.1  NP_001325426.1  NP_001325427.1  NP_001325428.1  NP_001325429.1  NP_566463.1 
BLAST NP_001319543.1  NP_001325426.1  NP_001325427.1  NP_001325428.1  NP_001325429.1  NP_566463.1 
Orthologous [Ortholog page] AT1G55140 (ath)  LOC4338401 (osa)  LOC4350155 (osa)  LOC11421489 (mtr)  LOC100193763 (zma)  LOC100242891 (vvi)  LOC100527214 (gma)  LOC101268172 (sly)  LOC103832611 (bra)  LOC103870100 (bra)  LOC107279353 (osa) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  chlo 1,  cyto 1,  cyto_E.R. 1  (predict for NP_001319543.1)
chlo 6,  mito 1,  cyto_nucl 1,  nucl 1,  cyto 1  (predict for NP_001325426.1)
chlo 7,  vacu 1,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for NP_001325427.1)
chlo 6,  vacu 1,  nucl 1,  cyto_nucl 1,  mito 1,  extr 1,  E.R._vacu 1  (predict for NP_001325428.1)
chlo 9,  mito 1  (predict for NP_001325429.1)
chlo 7,  mito 1,  nucl 1,  cyto_nucl 1  (predict for NP_566463.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319543.1)
chlo 7  (predict for NP_001325426.1)
chlo 7  (predict for NP_001325427.1)
chlo 7  (predict for NP_001325428.1)
chlo 7  (predict for NP_001325429.1)
chlo 7  (predict for NP_566463.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
Genes directly connected with AT3G13740 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 PDE318 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 844416
6.1 AT3G23700 Nucleic acid-binding proteins superfamily [detail] 821951
5.9 AT5G38290 Peptidyl-tRNA hydrolase family protein [detail] 833811
Coexpressed
gene list		 [Coexpressed gene list for AT3G13740]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256786_at
256786_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256786_at
256786_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256786_at
256786_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820583      
Refseq ID (protein) NP_001319543.1 
NP_001325426.1 
NP_001325427.1 
NP_001325428.1 
NP_001325429.1 
NP_566463.1 


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