[←][→] ath   At3g13960 Gene
functional annotation
Function   growth-regulating factor 5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009739 [list] [network] response to gibberellin  (116 genes)  IEP IMP  
GO:0006351 [list] [network] DNA-templated transcription  (159 genes)  IEA  
GO:0048366 [list] [network] leaf development  (465 genes)  IMP TAS  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM ISS  
GO MF
GO:0005524 [list] [network] ATP binding  (253 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_188012.2 
BLAST NP_188012.2 
Orthologous [Ortholog page] GRF6 (ath)  LOC4330903 (osa)  LOC7475696 (ppo)  LOC7490947 (ppo)  LOC11429462 (mtr)  LOC18100351 (ppo)  LOC18107701 (ppo)  LOC25486490 (mtr)  LOC25494182 (mtr)  GRF15 (gma)  GRF14 (gma)  GRF6 (gma)  GRF17 (gma)  GRF7 (gma)  GRF16 (gma)  LOC101255511 (sly)  LOC103828496 (bra)  GRF5 (bra)  LOC103870079 (bra)  LOC123128605 (tae)  LOC123138478 (tae)  LOC123145726 (tae)  LOC123403172 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_188012.2)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_188012.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with GRF5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 HB33 homeobox protein 33 [detail] 843861
8.1 CYP78A5 cytochrome P450, family 78, subfamily A, polypeptide 5 [detail] 837932
8.0 AT1G31310 hydroxyproline-rich glycoprotein family protein [detail] 840019
7.6 ABCG8 ABC-2 type transporter family protein [detail] 835363
7.3 AT5G66940 Dof-type zinc finger DNA-binding family protein [detail] 836828
6.7 AT1G62500 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 842547
6.1 MYB17 myb domain protein 17 [detail] 825297
6.1 E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 [detail] 830694
5.6 GRF9 growth-regulating factor 9 [detail] 819156
5.4 CHAL allergen-like protein [detail] 817587
5.4 AT2G35310 Transcriptional factor B3 family protein [detail] 818098
4.8 CYP78A7 cytochrome P450, family 78, subfamily A, polypeptide 7 [detail] 830858
4.8 AT5G39220 alpha/beta-Hydrolases superfamily protein [detail] 833918
Coexpressed
gene list		 [Coexpressed gene list for GRF5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258204_at
258204_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258204_at
258204_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258204_at
258204_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820609      
Refseq ID (protein) NP_188012.2 


The preparation time of this page was 0.1 [sec].