[←][→] ath   At3g13970 Gene
functional annotation
Function   Ubiquitin-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000045 [list] [network] autophagosome assembly  (5 genes)  IEA  
GO:0006914 [list] [network] autophagy  (32 genes)  IGI  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG ath04136 [list] [network] Autophagy - other (41 genes)
Protein NP_001326255.1  NP_001326256.1  NP_001326257.1  NP_188013.2 
BLAST NP_001326255.1  NP_001326256.1  NP_001326257.1  NP_188013.2 
Orthologous [Ortholog page] ATG12A (ath)  LOC4340429 (osa)  LOC7478107 (ppo)  LOC11423981 (mtr)  LOC100527905 (gma)  LOC101259616 (sly)  LOC103870078 (bra)  LOC103871063 (bra)  LOC112326971 (ppo)  LOC123167774 (tae)  LOC123401721 (hvu)  LOC123410606 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1  (predict for NP_001326255.1)
nucl 3,  chlo 2,  mito 2,  chlo_mito 2,  plas 1,  cyto_mito 1,  golg_plas 1  (predict for NP_001326256.1)
nucl 3,  chlo 2,  mito 2,  chlo_mito 2,  plas 1,  cyto_mito 1,  golg_plas 1  (predict for NP_001326257.1)
cyto 7,  chlo 2  (predict for NP_188013.2)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_001326255.1)
other 6  (predict for NP_001326256.1)
other 6  (predict for NP_001326257.1)
other 4,  chlo 3  (predict for NP_188013.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
Genes directly connected with APG12B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 AT1G30845 cell growth defect protein [detail] 839968
6.1 AT3G15420 Transcription factor TFIIIC, tau55-related protein [detail] 820781
5.7 AT5G03345 membrane magnesium transporter-like protein [detail] 831867
Coexpressed
gene list		 [Coexpressed gene list for APG12B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258205_at
258205_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258205_at
258205_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258205_at
258205_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820611      
Refseq ID (protein) NP_001326255.1 
NP_001326256.1 
NP_001326257.1 
NP_188013.2 


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