[←][→] ath   AT3G14310 Gene
functional annotation
Function   pectin methylesterase 3  
GO BP
GO:0050829 [list] [network] defense response to Gram-negative bacterium  (20 genes)  IMP  
GO:0009624 [list] [network] response to nematode  (84 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO:0042545 [list] [network] cell wall modification  (176 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (595 genes)  IEP  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0045330 [list] [network] aspartyl esterase activity  (67 genes)  IEA  
GO:0046910 [list] [network] pectinesterase inhibitor activity  (84 genes)  IBA  
GO:0030599 [list] [network] pectinesterase activity  (86 genes)  IBA IDA IMP ISS  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_188048.1 
BLAST NP_188048.1 
Orthologous [Ortholog page] PMEU1 (sly)  PME2 (ath)  LOC7471606 (ppo)  LOC11445926 (mtr)  LOC100251413 (vvi)  LOC100776623 (gma)  LOC100777646 (gma)  LOC103842123 (bra)  LOC103842134 (bra)  LOC103848519 (bra)  LOC103859565 (bra)  LOC103870041 (bra)  LOC104880619 (vvi) 
Subcellular
localization
wolf
plas 6,  nucl 1,  cyto 1,  extr 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_188048.1)
Subcellular
localization
TargetP
scret 2  (predict for NP_188048.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 3
ath00270 Cysteine and methionine metabolism 2
ath00480 Glutathione metabolism 2
ath00040 Pentose and glucuronate interconversions 2
ath00460 Cyanoamino acid metabolism 2
Genes directly connected with PME3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.9 AT4G19410 Pectinacetylesterase family protein [detail] 827682
4.8 XYL4 beta-D-xylosidase 4 [detail] 836578
4.6 GSH2 glutathione synthetase 2 [detail] 832797
4.4 scpl35 serine carboxypeptidase-like 35 [detail] 830722
3.7 AT5G04310 Pectin lyase-like superfamily protein [detail] 830310
Coexpressed
gene list		 [Coexpressed gene list for PME3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258369_at
258369_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258369_at
258369_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258369_at
258369_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820651      
Refseq ID (protein) NP_188048.1 


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