[←][→] ath   At3g14930 Gene
functional annotation
Function   Uroporphyrinogen decarboxylase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (9 genes)  IEA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004853 [list] [network] uroporphyrinogen decarboxylase activity  (2 genes)  IEA  
KEGG ath00860 [list] [network] Porphyrin metabolism (53 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_566495.1  NP_850587.1  NP_974316.1 
BLAST NP_566495.1  NP_850587.1  NP_974316.1 
Orthologous [Ortholog page] LOC4326635 (osa)  LOC11416440 (mtr)  LOC18095486 (ppo)  LOC100803496 (gma)  LOC100807032 (gma)  LOC101260578 (sly)  LOC103869973 (bra)  LOC123061522 (tae)  LOC123070166 (tae)  LOC123078601 (tae)  LOC123443911 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1  (predict for NP_566495.1)
chlo 4,  cyto 4,  nucl 1,  mito 1  (predict for NP_850587.1)
mito 6,  chlo_mito 4,  chlo 2  (predict for NP_974316.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_566495.1)
chlo 6  (predict for NP_850587.1)
mito 8  (predict for NP_974316.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 10
ath01240 Biosynthesis of cofactors 8
ath03060 Protein export 2
Genes directly connected with HEME1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 HEMC hydroxymethylbilane synthase [detail] 830724
11.6 HEME2 Uroporphyrinogen decarboxylase [detail] 818644
9.6 PPOX Flavin containing amine oxidoreductase family [detail] 827991
7.1 AT5G14260 Rubisco methyltransferase family protein [detail] 831276
Coexpressed
gene list		 [Coexpressed gene list for HEME1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257219_at
257219_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257219_at
257219_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257219_at
257219_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820722      
Refseq ID (protein) NP_566495.1 
NP_850587.1 
NP_974316.1 


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