[←][→] ath   At3g15000 Gene
functional annotation
Function   cobalt ion binding protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (15 genes)  IMP  
GO:0080156 [list] [network] mitochondrial mRNA modification  (27 genes)  IMP  
GO:0009451 [list] [network] RNA modification  (197 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA IPI  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA IPI ISM  
GO MF
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IPI  
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IPI  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_566496.1 
BLAST NP_566496.1 
Orthologous [Ortholog page] LOC4346456 (osa)  LOC4347529 (osa)  LOC7472357 (ppo)  LOC18095512 (ppo)  LOC25481875 (mtr)  LOC25487255 (mtr)  LOC25487256 (mtr)  LOC100802590 (gma)  LOC100808288 (gma)  LOC101259714 (sly)  LOC101263164 (sly)  LOC103841737 (bra)  LOC103859602 (bra)  LOC103869963 (bra)  LOC123104330 (tae)  LOC123112612 (tae)  LOC123116522 (tae)  LOC123116523 (tae)  LOC123122098 (tae)  LOC123151938 (tae)  LOC123157061 (tae)  LOC123164894 (tae)  LOC123399811 (hvu)  LOC123407808 (hvu) 
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1  (predict for NP_566496.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_566496.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with RIP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.4 MORF1 multiple organellar RNA editing factor [detail] 827747
9.2 smB small nuclear ribonucleoprotein associated protein B [detail] 827792
8.8 PYRD pyrimidine d [detail] 832394
8.5 MORF3 plastid developmental protein DAG [detail] 819864
Coexpressed
gene list		 [Coexpressed gene list for RIP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257218_at
257218_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257218_at
257218_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257218_at
257218_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820729      
Refseq ID (protein) NP_566496.1 


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