[←][→] ath   At3g16080 Gene
functional annotation
Function   Zinc-binding ribosomal protein family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO:0044085 [list] [network] cellular component biogenesis  (1358 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001327284.1  NP_566535.1 
BLAST NP_001327284.1  NP_566535.1 
Orthologous [Ortholog page] RPL37 (sly)  RPL37 (gma)  AT1G15250 (ath)  AT1G52300 (ath)  LOC4328048 (osa)  LOC4344579 (osa)  LOC7458981 (ppo)  LOC7470555 (ppo)  LOC7483529 (ppo)  LOC9267955 (osa)  LOC11435273 (mtr)  LOC25480464 (mtr)  LOC100306503 (gma)  LOC100527725 (gma)  LOC100809899 (gma)  LOC101248112 (sly)  LOC101260522 (sly)  LOC103832800 (bra)  LOC103859656 (bra)  LOC103868513 (bra)  LOC103869855 (bra)  LOC103871221 (bra)  LOC123128954 (tae)  LOC123131699 (tae)  LOC123135524 (tae)  LOC123139703 (tae)  LOC123143102 (tae)  LOC123146116 (tae)  LOC123401459 (hvu)  LOC123402129 (hvu) 
Subcellular
localization
wolf
mito 5,  chlo 4,  nucl 1  (predict for NP_001327284.1)
chlo 4,  mito 3,  nucl 2  (predict for NP_566535.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for NP_001327284.1)
chlo 8  (predict for NP_566535.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
Genes directly connected with AT3G16080 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.4 AT1G26880 Ribosomal protein L34e superfamily protein [detail] 838331
16.0 RPS28 ribosomal protein S28 [detail] 836535
15.9 AT3G23390 Zinc-binding ribosomal protein family protein [detail] 821920
15.7 AT3G22230 Ribosomal L27e protein family [detail] 821787
14.1 AT3G06680 Ribosomal L29e protein family [detail] 819853
13.5 AT1G07070 Ribosomal protein L35Ae family protein [detail] 837218
13.5 AT2G19750 Ribosomal protein S30 family protein [detail] 816494
9.8 AT5G67510 Translation protein SH3-like family protein [detail] 836887
Coexpressed
gene list		 [Coexpressed gene list for AT3G16080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258284_at
258284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258284_at
258284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258284_at
258284_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820853      
Refseq ID (protein) NP_001327284.1 
NP_566535.1 


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