[←][→] ath   AT3G16080 Gene
functional annotation
Function   Zinc-binding ribosomal protein family protein  
GO BP
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (136 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0019843 [list] [network] rRNA binding  (99 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_001327284.1  NP_566535.1 
BLAST NP_001327284.1  NP_566535.1 
Orthologous [Ortholog page] RPL37 (sly)  RPL37 (gma)  AT1G15250 (ath)  AT1G52300 (ath)  LOC4328048 (osa)  LOC4344579 (osa)  LOC7483529 (ppo)  LOC7495722 (ppo)  LOC11435273 (mtr)  LOC25480464 (mtr)  LOC100247371 (vvi)  LOC100253219 (vvi)  LOC100284994 (zma)  LOC100306503 (gma)  LOC100527725 (gma)  LOC100809899 (gma)  LOC101248112 (sly)  LOC101260522 (sly)  LOC103157007 (zma)  LOC103626516 (zma)  LOC103868513 (bra)  LOC103869855 (bra)  LOC103871221 (bra) 
Subcellular
localization
wolf
mito 5,  chlo 4,  nucl 1  (predict for NP_001327284.1)
chlo 4,  mito 3,  nucl 2  (predict for NP_566535.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for NP_001327284.1)
chlo 8  (predict for NP_566535.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
Genes directly connected with AT3G16080 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.1 AT1G26880 Ribosomal protein L34e superfamily protein [detail] 838331
15.5 AT3G23390 Zinc-binding ribosomal protein family protein [detail] 821920
15.1 AT2G36170 60S ribosomal protein L40-1 [detail] 818189
14.6 RPS28 ribosomal protein S28 [detail] 836535
13.7 AT3G06680 Ribosomal L29e protein family [detail] 819853
12.7 AT1G07070 Ribosomal protein L35Ae family protein [detail] 837218
11.2 AT2G19750 Ribosomal protein S30 family protein [detail] 816494
10.5 TIM8 translocase inner membrane subunit 8 [detail] 835153
10.0 AT2G37600 Ribosomal protein L36e family protein [detail] 818337
9.3 AT5G67510 Translation protein SH3-like family protein [detail] 836887
Coexpressed
gene list		 [Coexpressed gene list for AT3G16080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258284_at
258284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258284_at
258284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258284_at
258284_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820853      
Refseq ID (protein) NP_001327284.1 
NP_566535.1 


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