[][] ath   AT3G18035 Gene
functional annotation
Function   winged-helix DNA-binding transcription factor family protein
GO BP
GO:0016584 [list] [network] nucleosome positioning  (11 genes)  IBA  
GO:0031936 [list] [network] negative regulation of chromatin silencing  (14 genes)  IBA  
GO:0030261 [list] [network] chromosome condensation  (18 genes)  IBA  
GO:0045910 [list] [network] negative regulation of DNA recombination  (18 genes)  IBA  
GO:0006334 [list] [network] nucleosome assembly  (34 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IBA  
GO CC
GO:0000786 [list] [network] nucleosome  (45 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0031492 [list] [network] nucleosomal DNA binding  (9 genes)  IBA  
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA  
KEGG
Protein NP_001325770.1  NP_188431.3 
BLAST NP_001325770.1  NP_188431.3 
Orthologous [Ortholog page] AT-1SNBP (gma)HON5 (ath)LOC7462486 (ppo)LOC7493496 (ppo)LOC11409630 (mtr)LOC100788215 (gma)LOC100802941 (gma)LOC100853898 (vvi)LOC102660898 (gma)LOC103838863 (bra)LOC103868672 (bra)LOC103871451 (bra)
Subcellular
localization
wolf
nucl 10  (predict for NP_001325770.1)
nucl 9  (predict for NP_188431.3)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001325770.1)
other 7,  chlo 3  (predict for NP_188431.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HON4 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
10.7 HON5 high mobility group A5 [detail] 841283
7.9 AT1G06760 winged-helix DNA-binding transcription factor family protein [detail] 837187
7.3 AT2G30620 winged-helix DNA-binding transcription factor family protein [detail] 817612
Coexpressed
gene list
[Coexpressed gene list for HON4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258141_at
258141_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258141_at
258141_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258141_at
258141_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 821328    
Refseq ID (protein) NP_001325770.1 
NP_188431.3 


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