[←][→] ath   At3g18710 Gene
functional annotation
Function   plant U-box 29    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA  
GO CC
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0070696 [list] [network] transmembrane receptor protein serine/threonine kinase binding  (8 genes)  IPI  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IEA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
KEGG
Protein NP_188501.1 
BLAST NP_188501.1 
Orthologous [Ortholog page] AT5G09800 (ath)  CMPG2 (ath)  LOC4329591 (osa)  LOC4335817 (osa)  LOC7466408 (ppo)  LOC7469210 (ppo)  LOC7485055 (ppo)  LOC11426092 (mtr)  LOC11428633 (mtr)  LOC18099007 (ppo)  LOC100781196 (gma)  LOC100786235 (gma)  LOC100799627 (gma)  LOC100801033 (gma)  LOC100811783 (gma)  LOC101243947 (sly)  LOC101261019 (sly)  LOC103837900 (bra)  LOC103859764 (bra)  LOC103869533 (bra)  LOC103873891 (bra)  LOC123045441 (tae)  LOC123053271 (tae)  LOC123189185 (tae)  LOC123426698 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1  (predict for NP_188501.1)
Subcellular
localization
TargetP
other 9  (predict for NP_188501.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB29 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.6 DOF1 DOF zinc finger protein 1 [detail] 841595
5.3 AT4G39570 Galactose oxidase/kelch repeat superfamily protein [detail] 830111
5.0 AT4G37100 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [detail] 829864
4.3 CRLK1 Protein kinase superfamily protein [detail] 835548
Coexpressed
gene list		 [Coexpressed gene list for PUB29]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257748_at
257748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257748_at
257748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257748_at
257748_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821402      
Refseq ID (protein) NP_188501.1 


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