[][] ath   AT3G18710 Gene
functional annotation
Function   plant U-box 29
GO BP
GO:0010200 [list] [network] response to chitin  (142 genes)  IEP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA  
GO CC
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0070696 [list] [network] transmembrane receptor protein serine/threonine kinase binding  (8 genes)  IPI  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
KEGG
Protein NP_188501.1 
BLAST NP_188501.1 
Orthologous [Ortholog page] AT5G09800 (ath)CMPG2 (ath)LOC4329591 (osa)LOC4335817 (osa)LOC7466408 (ppo)LOC7469210 (ppo)LOC11426092 (mtr)LOC11428633 (mtr)LOC100251262 (vvi)LOC100264434 (vvi)LOC100280896 (zma)LOC100284248 (zma)LOC100781196 (gma)LOC100786235 (gma)LOC100799627 (gma)LOC100801033 (gma)LOC100811783 (gma)LOC101243947 (sly)LOC101261019 (sly)LOC103653608 (zma)LOC103837900 (bra)LOC103852710 (bra)LOC103859764 (bra)LOC103869533 (bra)LOC103873891 (bra)
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1  (predict for NP_188501.1)
Subcellular
localization
TargetP
other 9  (predict for NP_188501.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB29 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.8 DOF1 DOF zinc finger protein 1 [detail] 841595
5.4 ERF5 ethylene responsive element binding factor 5 [detail] 834770
5.2 CMPG2 CYS, MET, PRO, and GLY protein 2 [detail] 836587
4.8 AT3G22540 hypothetical protein (DUF1677) [detail] 821825
Coexpressed
gene list
[Coexpressed gene list for PUB29]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257748_at
257748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257748_at
257748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
257748_at
257748_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 821402    
Refseq ID (protein) NP_188501.1 


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