[←][→] ath   AT3G18770 Gene
functional annotation
Function   Autophagy-related protein 13  
GO BP
GO:0000423 [list] [network] mitophagy  (1 genes)  IBA  
GO:0034727 [list] [network] piecemeal microautophagy of the nucleus  (3 genes)  IBA  
GO:0034497 [list] [network] protein localization to phagophore assembly site  (5 genes)  IBA  
GO:0000422 [list] [network] autophagy of mitochondrion  (12 genes)  IBA  
GO:0016236 [list] [network] macroautophagy  (25 genes)  IBA  
GO:0032147 [list] [network] activation of protein kinase activity  (55 genes)  IBA  
GO CC
GO:1990316 [list] [network] Atg1/ULK1 kinase complex  (2 genes)  IBA  
GO:0000407 [list] [network] phagophore assembly site  (15 genes)  IBA  
GO:0019898 [list] [network] extrinsic component of membrane  (62 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0019887 [list] [network] protein kinase regulator activity  (77 genes)  IBA  
GO:0019901 [list] [network] protein kinase binding  (101 genes)  IBA  
KEGG ath04136 [list] [network] Autophagy - other (40 genes)
Protein NP_188507.1 
BLAST NP_188507.1 
Orthologous [Ortholog page] LOC7461697 (ppo)  LOC9272454 (osa)  LOC11424978 (mtr)  LOC11432206 (mtr)  LOC100193032 (zma)  LOC100245377 (vvi)  LOC100798585 (gma)  LOC100816476 (gma)  LOC103654631 (zma)  LOC103837855 (bra)  LOC103869528 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  cysk 1  (predict for NP_188507.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_188507.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
Genes directly connected with AT3G18770 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 ATG18G autophagy 18 G-like protein [detail] 838702
5.3 AT3G61960 Protein kinase superfamily protein [detail] 825369
5.3 AT4G08540 DNA-directed RNA polymerase II protein [detail] 826413
Coexpressed
gene list		 [Coexpressed gene list for AT3G18770]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257802_at
257802_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257802_at
257802_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257802_at
257802_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821408      
Refseq ID (protein) NP_188507.1 


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