[←][→] ath   AT3G18790 Gene
functional annotation
Function   pre-mRNA-splicing factor ISY1-like protein  
GO BP
GO:0000389 [list] [network] mRNA 3'-splice site recognition  (1 genes)  IBA  
GO:0000350 [list] [network] generation of catalytic spliceosome for second transesterification step  (3 genes)  IBA  
GO CC
GO:0071020 [list] [network] post-spliceosomal complex  (3 genes)  IBA  
GO:0000974 [list] [network] Prp19 complex  (11 genes)  IBA  
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0000384 [list] [network] first spliceosomal transesterification activity  (2 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_188509.1 
BLAST NP_188509.1 
Orthologous [Ortholog page] LOC4329902 (osa)  LOC11437391 (mtr)  LOC100250525 (vvi)  LOC100282530 (zma)  LOC100813312 (gma)  LOC101262521 (sly)  LOC103869523 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_188509.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188509.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 3
Genes directly connected with AT3G18790 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 CSP3 cold shock domain protein 3 [detail] 816297
8.9 AT1G55460 DNA/RNA-binding protein Kin17, conserved region [detail] 841993
7.6 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [detail] 822039
7.3 NFS1 nitrogen fixation S (NIFS)-like 1 [detail] 836701
5.3 AT2G30960 myosin-M heavy chain-like protein [detail] 817647
Coexpressed
gene list		 [Coexpressed gene list for AT3G18790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257803_at
257803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257803_at
257803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257803_at
257803_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821412      
Refseq ID (protein) NP_188509.1 


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