[←][→] ath   At3g19380 Gene
functional annotation
Function   plant U-box 25    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IGI IMP  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_566632.1 
BLAST NP_566632.1 
Orthologous [Ortholog page] PUB26 (ath)  LOC4329616 (osa)  LOC7477853 (ppo)  LOC7490041 (ppo)  LOC11444580 (mtr)  LOC100778730 (gma)  LOC100810176 (gma)  LOC101261465 (sly)  LOC103832926 (bra)  LOC103837304 (bra)  LOC103869466 (bra)  LOC123127991 (tae)  LOC123137635 (tae)  LOC123145088 (tae)  LOC123403819 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1  (predict for NP_566632.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566632.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
Genes directly connected with PUB25 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.9 PUB26 plant U-box 26 [detail] 841401
5.9 AT4G21740 uncharacterized protein [detail] 828262
4.8 AT2G39870 uncharacterized protein [detail] 818574
Coexpressed
gene list		 [Coexpressed gene list for PUB25]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258021_at
258021_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258021_at
258021_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258021_at
258021_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821472      
Refseq ID (protein) NP_566632.1 


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