[][] ath   AT3G19450 Gene
functional annotation
Function   GroES-like zinc-binding alcohol dehydrogenase family protein
GO BP
GO:0009809 [list] [network] lignin biosynthetic process  (47 genes)  IBA IGI TAS  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0052747 [list] [network] sinapyl alcohol dehydrogenase activity  (11 genes)  IEA  
GO:0045551 [list] [network] cinnamyl-alcohol dehydrogenase activity  (12 genes)  IBA IDA IMP  
GO:0016616 [list] [network] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor  (158 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG ath00940 [list] [network] Phenylpropanoid biosynthesis (166 genes)
Protein NP_188576.1 
BLAST NP_188576.1 
Orthologous [Ortholog page] LOC542663 (zma)CAD5 (ath)LOC4328552 (osa)LOC7490064 (ppo)LOC25485411 (mtr)LOC100257308 (vvi)LOC100262421 (vvi)LOC100777558 (gma)LOC100804892 (gma)LOC101250635 (sly)LOC103840386 (bra)LOC103862330 (bra)LOC103869453 (bra)
Subcellular
localization
wolf
cyto 4,  chlo 2,  plas 2,  cyto_nucl 2  (predict for NP_188576.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188576.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 12
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath01230 Biosynthesis of amino acids 4
ath00999 Biosynthesis of secondary metabolites - unclassified 4
Genes directly connected with ATCAD4 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.0 PAL1 PHE ammonia lyase 1 [detail] 818280
8.9 CM1 chorismate mutase 1 [detail] 822573
8.3 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 829551
5.0 AT3G11490 rac GTPase activating protein [detail] 820322
Coexpressed
gene list
[Coexpressed gene list for ATCAD4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258023_at
258023_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258023_at
258023_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258023_at
258023_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 821479    
Refseq ID (protein) NP_188576.1 


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