ATTED-II : GeneID search result

[←][→] ath AT3G20300 Gene

functional annotation

Function

extracellular ligand-gated ion channel protein (DUF3537)

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

KEGG

Protein

NP_566658.1

BLAST

NP_566658.1

Orthologous

[Ortholog page] MRB1 (ath) AT1G50630 (ath) LOC4341599 (osa) LOC7478701 (ppo) LOC11443885 (mtr) LOC25489025 (mtr) LOC100216686 (zma) LOC100245205 (vvi) LOC100806904 (gma) LOC100809035 (gma) LOC100816572 (gma) LOC100817487 (gma) LOC100854148 (vvi) LOC100854830 (vvi) LOC101243767 (sly) LOC101249979 (sly) LOC101266537 (sly) LOC101267356 (sly) LOC103836644 (bra) LOC103859848 (bra) LOC103859918 (bra) LOC103861292 (bra) LOC103869337 (bra) LOC103871333 (bra)

Subcellular
localization
wolf

plas 4, E.R. 2, cysk_plas 2, mito_plas 2, cyto_plas 2

(predict for NP_566658.1)

Subcellular
localization
TargetP

other 9

(predict for NP_566658.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G20300 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.8	MPK12	mitogen-activated protein kinase 12	[detail]	819215
4.8	ABCG21	ABC-2 type transporter family protein	[detail]	822149
4.5	ALMT12	aluminum-activated, malate transporter 12	[detail]	827522

Coexpressed
gene list

[Coexpressed gene list for AT3G20300]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257672_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257672_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257672_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	821574
Refseq ID (protein)	NP_566658.1

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