[][] ath   AT3G20550 Gene
functional annotation
Function   SMAD/FHA domain-containing protein
GO BP
GO:0035196 [list] [network] production of miRNAs involved in gene silencing by miRNA  (29 genes)  IBA IDA IMP  
GO:0048638 [list] [network] regulation of developmental growth  (156 genes)  IMP  
GO:0051301 [list] [network] cell division  (352 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IMP  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_188691.1 
BLAST NP_188691.1 
Orthologous [Ortholog page] LOC4339499 (osa)LOC4339504 (osa)LOC7454424 (ppo)LOC11406068 (mtr)LOC11441498 (mtr)LOC100192588 (zma)LOC100267032 (vvi)LOC100780414 (gma)LOC100812104 (gma)LOC101248430 (sly)LOC103859863 (bra)
Subcellular
localization
wolf
nucl 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_188691.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for NP_188691.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with DDL on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
10.4 AT5G22080 Chaperone DnaJ-domain superfamily protein [detail] 832269
8.5 AT5G53800 nucleic acid-binding protein [detail] 835461
8.4 AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein [detail] 842315
8.2 VIP4 leo1-like family protein [detail] 836236
8.2 AT5G12410 THUMP domain-containing protein [detail] 831116
Coexpressed
gene list
[Coexpressed gene list for DDL]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257092_at
257092_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257092_at
257092_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
257092_at
257092_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 821601    
Refseq ID (protein) NP_188691.1 


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