[←][→] ath   At3g20780 Gene
functional annotation
Function   topoisomerase 6 subunit B    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0042023 [list] [network] DNA endoreduplication  (22 genes)  IMP  
GO:0010026 [list] [network] trichome differentiation  (86 genes)  IMP  
GO:0009741 [list] [network] response to brassinosteroid  (99 genes)  IMP  
GO:0007389 [list] [network] pattern specification process  (295 genes)  IMP  
GO:0000902 [list] [network] cell morphogenesis  (474 genes)  IMP  
GO CC
GO:0009330 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex  (3 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity  (10 genes)  ISS  
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_188714.2 
BLAST NP_188714.2 
Orthologous [Ortholog page] TOP6B (osa)  LOC11421475 (mtr)  LOC18097264 (ppo)  LOC100809558 (gma)  LOC101263928 (sly)  LOC103869277 (bra)  LOC123103413 (tae)  LOC123111610 (tae)  LOC123120981 (tae)  LOC123394977 (hvu) 
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for NP_188714.2)
Subcellular
localization
TargetP
other 8  (predict for NP_188714.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TOP6B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 AT5G04320 Shugoshin C terminus [detail] 830311
6.1 TTN7 Structural maintenance of chromosomes (SMC) family protein [detail] 817259
5.8 AT2G47310 flowering time control protein-related / FCA gamma-like protein [detail] 819344
Coexpressed
gene list		 [Coexpressed gene list for TOP6B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257982_at
257982_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257982_at
257982_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257982_at
257982_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821626      
Refseq ID (protein) NP_188714.2 


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