[←][→] ath   At3g21230 Gene
functional annotation
Function   4-coumarate:CoA ligase 5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009699 [list] [network] phenylpropanoid biosynthetic process  (87 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  IDA  
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (39 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (128 genes)
Protein NP_001326760.1  NP_001326761.1  NP_001326762.1  NP_188760.3 
BLAST NP_001326760.1  NP_001326761.1  NP_001326762.1  NP_188760.3 
Orthologous [Ortholog page] LOC103859897 (bra) 
Subcellular
localization
wolf
chlo 2,  plas 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  E.R._plas 2  (predict for NP_001326760.1)
chlo 2,  plas 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  E.R._plas 2  (predict for NP_001326761.1)
chlo 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  plas 1,  cyto_E.R. 1  (predict for NP_001326762.1)
vacu 3,  chlo 2,  E.R. 2,  plas 1,  cyto_E.R. 1  (predict for NP_188760.3)
Subcellular
localization
TargetP
other 9  (predict for NP_001326760.1)
other 9  (predict for NP_001326761.1)
other 9  (predict for NP_001326762.1)
other 9  (predict for NP_188760.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 12
ath01230 Biosynthesis of amino acids 4
ath00941 Flavonoid biosynthesis 3
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
Genes directly connected with 4CL5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.4 4CL2 4-coumarate:CoA ligase 2 [detail] 821678
8.6 4CL1 4-coumarate:CoA ligase 1 [detail] 841593
6.6 AT1G22410 Class-II DAHP synthetase family protein [detail] 838847
6.0 CCR2 cinnamoyl coa reductase [detail] 844421
5.4 RBOH F respiratory burst oxidase protein F [detail] 842710
Coexpressed
gene list		 [Coexpressed gene list for 4CL5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258037_at
258037_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258037_at
258037_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258037_at
258037_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821677      
Refseq ID (protein) NP_001326760.1 
NP_001326761.1 
NP_001326762.1 
NP_188760.3 


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