[←][→] ath   At3g21540 Gene
functional annotation
Function   transducin family protein / WD-40 repeat family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_188791.3 
BLAST NP_188791.3 
Orthologous [Ortholog page] LOC4331644 (osa)  LOC18100122 (ppo)  LOC25494154 (mtr)  LOC100775810 (gma)  LOC100800955 (gma)  LOC101257021 (sly)  LOC103870858 (bra)  LOC123087844 (tae)  LOC123093534 (tae)  LOC123098806 (tae)  LOC123449829 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_188791.3)
Subcellular
localization
TargetP
other 5  (predict for NP_188791.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 11
ath03020 RNA polymerase 2
Genes directly connected with AT3G21540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.5 AT1G63810 nucleolar protein [detail] 842684
13.9 NRPA1 nuclear RNA polymerase A1 [detail] 824935
13.3 AT2G18900 Transducin/WD40 repeat-like superfamily protein [detail] 816406
13.1 AT3G57940 GNAT acetyltransferase (DUF699) [detail] 824963
13.1 AT5G11240 transducin family protein / WD-40 repeat family protein [detail] 830994
13.0 PUM24 pumilio 24 [detail] 820934
13.0 AT3G18600 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 821391
Coexpressed
gene list		 [Coexpressed gene list for AT3G21540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258166_at
258166_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258166_at
258166_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258166_at
258166_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821708      
Refseq ID (protein) NP_188791.3 


The preparation time of this page was 0.1 [sec].