[←][→] ath   AT3G21540 Gene
functional annotation
Function   transducin family protein / WD-40 repeat family protein  
GO BP
GO CC
GO:0034388 [list] [network] Pwp2p-containing subcomplex of 90S preribosome  (5 genes)  IBA  
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_188791.3 
BLAST NP_188791.3 
Orthologous [Ortholog page] LOC4331644 (osa)  LOC25494154 (mtr)  LOC100250257 (vvi)  LOC100501489 (zma)  LOC100775810 (gma)  LOC100800955 (gma)  LOC101257021 (sly)  LOC103870858 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_188791.3)
Subcellular
localization
TargetP
other 5  (predict for NP_188791.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 3
Genes directly connected with AT3G21540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.0 AT1G63810 nucleolar protein [detail] 842684
13.9 AT3G06530 ARM repeat superfamily protein [detail] 819831
13.6 NRPA1 nuclear RNA polymerase A1 [detail] 824935
13.4 AT3G57940 GNAT acetyltransferase (DUF699) [detail] 824963
13.1 PUM24 pumilio 24 [detail] 820934
11.8 AT5G11240 transducin family protein / WD-40 repeat family protein [detail] 830994
11.0 RBL Noc2p family [detail] 824716
10.2 NAF1 nuclear assembly factor 1 [detail] 839468
8.7 AT4G04670 Met-10+ like family protein / kelch repeat-containing protein [detail] 825800
Coexpressed
gene list		 [Coexpressed gene list for AT3G21540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258166_at
258166_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258166_at
258166_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258166_at
258166_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821708      
Refseq ID (protein) NP_188791.3 


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