[←][→] ath   At3g22200 Gene
functional annotation
Function   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006105 [list] [network] succinate metabolic process  (1 genes)  IMP  
GO:0019484 [list] [network] beta-alanine catabolic process  (1 genes)  IMP  
GO:0006540 [list] [network] glutamate decarboxylation to succinate  (2 genes)  IMP  
GO:0009448 [list] [network] gamma-aminobutyric acid metabolic process  (2 genes)  IMP  
GO:0009450 [list] [network] gamma-aminobutyric acid catabolic process  (2 genes)  IMP  
GO:0009865 [list] [network] pollen tube adhesion  (2 genes)  IMP  
GO:0006020 [list] [network] inositol metabolic process  (7 genes)  IMP  
GO:0006541 [list] [network] glutamine metabolic process  (8 genes)  IMP  
GO:0006536 [list] [network] glutamate metabolic process  (17 genes)  IMP  
GO:0009943 [list] [network] adaxial/abaxial axis specification  (33 genes)  IMP  
GO:0005985 [list] [network] sucrose metabolic process  (40 genes)  IMP  
GO:0010183 [list] [network] pollen tube guidance  (49 genes)  IMP  
GO:0009860 [list] [network] pollen tube growth  (149 genes)  IMP NAS  
GO:0048366 [list] [network] leaf development  (465 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IMP  
GO:0048364 [list] [network] root development  (1192 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (1318 genes)  IMP  
GO:0010154 [list] [network] fruit development  (1349 genes)  IMP  
GO:0010033 [list] [network] response to organic substance  (3399 genes)  IMP  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0034387 [list] [network] 4-aminobutyrate:pyruvate transaminase activity  (1 genes)  IDA  
GO:0003867 [list] [network] 4-aminobutyrate transaminase activity  (2 genes)  IMP NAS  
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
KEGG ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)
ath00650 [list] [network] Butanoate metabolism (20 genes)
Protein NP_001189947.1  NP_566700.1 
BLAST NP_001189947.1  NP_566700.1 
Orthologous [Ortholog page] GABA-TP1 (sly)  GABA-TP2 (sly)  GABA-TP3 (sly)  LOC4328053 (osa)  LOC4336982 (osa)  LOC4336983 (osa)  LOC4344928 (osa)  LOC7455851 (ppo)  LOC7495636 (ppo)  LOC11438136 (mtr)  LOC100682496 (tae)  LOC100792355 (gma)  LOC100815181 (gma)  LOC101258391 (sly)  LOC103834779 (bra)  LOC103869111 (bra)  LOC123161053 (tae)  LOC123165077 (tae)  LOC123190180 (tae)  LOC123413507 (hvu)  LOC123427606 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_001189947.1)
mito 6,  chlo_mito 5,  chlo 4,  cyto_mito 3  (predict for NP_566700.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001189947.1)
mito 9  (predict for NP_566700.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath01200 Carbon metabolism 6
ath00250 Alanine, aspartate and glutamate metabolism 4
ath00071 Fatty acid degradation 4
ath01212 Fatty acid metabolism 4
Genes directly connected with POP2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 ASP3 aspartate aminotransferase 3 [detail] 831024
7.0 CSY2 citrate synthase 2 [detail] 825044
6.9 ALDH6B2 aldehyde dehydrogenase 6B2 [detail] 815903
6.5 ALDH12A1 aldehyde dehydrogenase 12A1 [detail] 836373
Coexpressed
gene list		 [Coexpressed gene list for POP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256765_at
256765_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256765_at
256765_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256765_at
256765_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821784      
Refseq ID (protein) NP_001189947.1 
NP_566700.1 


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