ATTED-II : GeneID search result

[←][→] ath AT3G23050 Gene

functional annotation

Function

indole-3-acetic acid 7

GO BP

GO:0009630 [list] [network] gravitropism	(90 genes)	IMP
GO:0009734 [list] [network] auxin-activated signaling pathway	(196 genes)	IEA
GO:0009611 [list] [network] response to wounding	(212 genes)	IEP
GO:0009753 [list] [network] response to jasmonic acid	(222 genes)	IEP
GO:0009414 [list] [network] response to water deprivation	(361 genes)	IMP
GO:0009733 [list] [network] response to auxin	(407 genes)	TAS
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IDA ISM

GO MF

GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

ath04075 [list] [network] Plant hormone signal transduction (273 genes)

Protein

NP_001326465.1 NP_188945.1 NP_974355.1

BLAST

NP_001326465.1 NP_188945.1 NP_974355.1

Orthologous

[Ortholog page] IAA7 (sly) IAA16 (sly) IAA17 (sly) SLR1 (gma) AUX28 (gma) IAA16 (ath) IAA14 (ath) AXR3 (ath) LOC4323871 (osa) LOC4333511 (osa) LOC4337971 (osa) LOC4341432 (osa) LOC4352721 (osa) LOC7473446 (ppo) LOC7474609 (ppo) LOC7480000 (ppo) LOC7490981 (ppo) LOC7498041 (ppo) LOC11420300 (mtr) LOC11436361 (mtr) LOC25484348 (mtr) LOC25484639 (mtr) LOC25499197 (mtr) LOC100193444 (zma) LOC100247336 (vvi) LOC100250231 (vvi) LOC100254530 (vvi) LOC100258296 (vvi) LOC100259693 (vvi) LOC100272577 (zma) LOC100284259 (zma) LOC100499872 (gma) LOC100500488 (gma) LOC100780214 (gma) LOC100781847 (gma) LOC100796888 (gma) LOC100803065 (gma) LOC100803986 (gma) LOC100810013 (gma) LOC100810762 (gma) LOC100815098 (gma) LOC101055547 (sly) IAA15 (sly) LOC103833444 (bra) LOC103836586 (bra) LOC103843662 (bra) LOC103844275 (bra) LOC103849138 (bra) LOC103850030 (bra) LOC103859990 (bra) LOC103868941 (bra)

Subcellular
localization
wolf

chlo 8, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1	(predict for NP_001326465.1)
chlo 8, nucl 2	(predict for NP_188945.1)
chlo 8, nucl 1	(predict for NP_974355.1)

Subcellular
localization
TargetP

other 5	(predict for NP_001326465.1)
other 5	(predict for NP_188945.1)
other 5	(predict for NP_974355.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

Genes directly connected with IAA7 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.5	AT1G52190	Major facilitator superfamily protein	[detail]	841649
7.3	DGR2	transmembrane protein, putative (Protein of unknown function, DUF642)	[detail]	832620
6.3	XTH4	xyloglucan endotransglucosylase/hydrolase 4	[detail]	815247
5.1	PAT1	GRAS family transcription factor	[detail]	834867
4.7	IAA16	indoleacetic acid-induced protein 16	[detail]	819633

Coexpressed
gene list

[Coexpressed gene list for IAA7]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257769_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257769_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257769_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	821879
Refseq ID (protein)	NP_001326465.1
	NP_188945.1
	NP_974355.1

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