[←][→] ath   At3g25520 Gene
functional annotation
Function   ribosomal protein L5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009955 [list] [network] adaxial/abaxial pattern specification  (49 genes)  IGI IMP  
GO:0006913 [list] [network] nucleocytoplasmic transport  (50 genes)  TAS  
GO:0009965 [list] [network] leaf morphogenesis  (102 genes)  IMP  
GO:0051301 [list] [network] cell division  (442 genes)  IMP  
GO:0010015 [list] [network] root morphogenesis  (669 genes)  IMP  
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005773 [list] [network] vacuole  (971 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0008097 [list] [network] 5S rRNA binding  (3 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_001189970.1  NP_001327862.1  NP_566767.1 
BLAST NP_001189970.1  NP_001327862.1  NP_566767.1 
Orthologous [Ortholog page] RPL5B (ath)  LOC4325100 (osa)  LOC7469360 (ppo)  LOC9271934 (osa)  LOC11411613 (mtr)  LOC18104605 (ppo)  LOC18108544 (ppo)  LOC25500767 (mtr)  LOC100785668 (gma)  LOC100786189 (gma)  LOC100805868 (gma)  LOC100817746 (gma)  LOC100818819 (gma)  LOC100873128 (tae)  LOC101245873 (sly)  LOC101253089 (sly)  LOC101262823 (sly)  LOC103828552 (bra)  LOC103860287 (bra)  LOC103874949 (bra)  LOC112324032 (ppo)  LOC123045417 (tae)  LOC123189163 (tae)  LOC123426672 (hvu)  LOC123452092 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_001189970.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_001327862.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_566767.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001189970.1)
mito 6,  other 5  (predict for NP_001327862.1)
mito 6,  other 5  (predict for NP_566767.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
Genes directly connected with ATL5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
22.8 RPL5B ribosomal protein L5 B [detail] 833970
16.8 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 819374
15.7 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 825462
14.6 AT2G17360 Ribosomal protein S4 (RPS4A) family protein [detail] 816243
14.3 AT2G44120 Ribosomal protein L30/L7 family protein [detail] 819018
Coexpressed
gene list		 [Coexpressed gene list for ATL5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257906_at
257906_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257906_at
257906_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257906_at
257906_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822138      
Refseq ID (protein) NP_001189970.1 
NP_001327862.1 
NP_566767.1 


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