ATTED-II : GeneID search result

[←][→] ath At3g26680 Gene

functional annotation

Function

DNA repair metallo-beta-lactamase family protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO:0006281 [list] [network] DNA repair

(203 genes)

IMP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

KEGG

Protein

NP_001319649.1 NP_001319650.1 NP_001327585.1 NP_850635.1

BLAST

NP_001319649.1 NP_001319650.1 NP_001327585.1 NP_850635.1

Orthologous

[Ortholog page] LOC4335730 (osa) LOC7466282 (ppo) LOC11439525 (mtr) LOC100790844 (gma) LOC103875283 (bra) LOC123045357 (tae) LOC123189110 (tae) LOC123426598 (hvu)

Subcellular
localization
wolf

nucl 7, cyto 2	(predict for NP_001319649.1)
nucl 7, cyto 2	(predict for NP_001319650.1)
nucl 8, chlo 1, cyto 1, vacu 1	(predict for NP_001327585.1)
nucl 7, cyto 2	(predict for NP_850635.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001319649.1)
other 9	(predict for NP_001319650.1)
other 9	(predict for NP_001327585.1)
other 9	(predict for NP_850635.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SNM1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.5	AT3G26670	magnesium transporter, putative (DUF803)	[detail]	822279
5.9	FRS2	FAR1-related sequence 2	[detail]	817785
5.4	ABCB21	P-glycoprotein 21	[detail]	825388

Coexpressed
gene list

[Coexpressed gene list for SNM1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257829_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257829_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257829_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	822280
Refseq ID (protein)	NP_001319649.1
	NP_001319650.1
	NP_001327585.1
	NP_850635.1

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