[←][→] ath   At3g27380 Gene
functional annotation
Function   succinate dehydrogenase 2-1      
GO BP
GO:0006121 [list] [network] mitochondrial electron transport, succinate to ubiquinone  (8 genes)  ISS  
GO CC
GO:0045273 [list] [network] respiratory chain complex II  (13 genes)  IDA  
GO:0045281 [list] [network] succinate dehydrogenase complex  (13 genes)  ISS  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO MF
GO:0008177 [list] [network] succinate dehydrogenase (ubiquinone) activity  (5 genes)  IEA  
GO:0000104 [list] [network] succinate dehydrogenase activity  (9 genes)  ISS  
GO:0009055 [list] [network] electron transfer activity  (78 genes)  ISS  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00190 [list] [network] Oxidative phosphorylation (170 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_001118718.1  NP_189374.1 
BLAST NP_001118718.1  NP_189374.1 
Orthologous [Ortholog page] SDH2-2 (ath)  SDH2-3 (ath)  LOC4344541 (osa)  LOC4346890 (osa)  LOC7456195 (ppo)  LOC25479657 (mtr)  LOC25485801 (mtr)  LOC100736507 (sly)  LOC100796630 (gma)  LOC100815377 (gma)  LOC101252979 (sly)  LOC101253277 (sly)  LOC103836989 (bra)  LOC103850190 (bra)  LOC103854239 (bra)  LOC103855282 (bra)  LOC103875224 (bra)  LOC123106994 (tae)  LOC123124739 (tae)  LOC123147503 (tae)  LOC123156079 (tae)  LOC123164266 (tae)  LOC123396703 (hvu)  LOC123411184 (hvu) 
Subcellular
localization
wolf
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_001118718.1)
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_189374.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001118718.1)
mito 6  (predict for NP_189374.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
ath01200 Carbon metabolism 5
ath00020 Citrate cycle (TCA cycle) 4
ath00480 Glutathione metabolism 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with SDH2-1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.4 SDH2-2 succinate dehydrogenase 2-2 [detail] 834065
9.0 AT3G27240 Cytochrome C1 family [detail] 822343
8.4 SDH1-1 succinate dehydrogenase 1-1 [detail] 836809
6.9 CYTC-2 cytochrome c-2 [detail] 826595
6.3 AT2G39270 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 818512
6.2 SDRB short-chain dehydrogenase-reductase B [detail] 820462
Coexpressed
gene list		 [Coexpressed gene list for SDH2-1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257742_at
257742_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257742_at
257742_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257742_at
257742_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822359      
Refseq ID (protein) NP_001118718.1 
NP_189374.1 


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