[←][→] ath   AT3G27640 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001326885.1  NP_566822.1 
BLAST NP_001326885.1  NP_566822.1 
Orthologous [Ortholog page] LOC4333813 (osa)  LOC7496841 (ppo)  LOC11421076 (mtr)  LOC100249087 (vvi)  LOC100273556 (zma)  LOC100284874 (zma)  LOC100775857 (gma)  LOC100819114 (gma)  LOC101259306 (sly)  LOC103836999 (bra)  LOC103875199 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  chlo_mito 3  (predict for NP_001326885.1)
nucl 6,  chlo 1,  cysk 1,  cyto 1,  mito 1,  cysk_plas 1  (predict for NP_566822.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001326885.1)
chlo 4,  mito 3  (predict for NP_566822.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
Genes directly connected with AT3G27640 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
16.2 RPA70D Replication factor-A protein 1-like protein [detail] 836221
15.4 ABAP1 ARMADILLO BTB protein 1 [detail] 831145
15.4 BARD1 breast cancer associated RING 1 [detail] 839329
14.1 AT1G75150 DNA ligase-like protein [detail] 843852
12.4 ATXR6 TRITHORAX-RELATED PROTEIN 6 [detail] 832503
12.3 WEE1 WEE1-like kinase [detail] 839453
12.3 MCM10 minichromosome maintenance 10 [detail] 816632
10.2 AT1G27880 DEAD/DEAH box RNA helicase family protein [detail] 839681
10.0 AT1G67180 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein [detail] 843038
8.1 AT2G41450 N-acetyltransferase [detail] 818743
5.7 ICK6 inhibitor/interactor with cyclin-dependent kinase [detail] 834940
Coexpressed
gene list		 [Coexpressed gene list for AT3G27640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258242_at
258242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258242_at
258242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258242_at
258242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822386      
Refseq ID (protein) NP_001326885.1 
NP_566822.1 


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