[←][→] ath   At3g27690 Gene
functional annotation
Function   photosystem II light harvesting complex protein 2.3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009769 [list] [network] photosynthesis, light harvesting in photosystem II  (6 genes)  IDA  
GO:1903428 [list] [network] positive regulation of reactive oxygen species biosynthetic process  (7 genes)  ISS  
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (10 genes)  IDA  
GO:0030104 [list] [network] water homeostasis  (15 genes)  ISS  
GO:0009269 [list] [network] response to desiccation  (25 genes)  IEP  
GO:0009645 [list] [network] response to low light intensity stimulus  (33 genes)  IEP  
GO:0090333 [list] [network] regulation of stomatal closure  (39 genes)  ISS  
GO:0010218 [list] [network] response to far red light  (48 genes)  IDA  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IEP  
GO:0010114 [list] [network] response to red light  (101 genes)  IDA  
GO:0071215 [list] [network] cellular response to abscisic acid stimulus  (230 genes)  ISS  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IDA  
GO CC
GO:0009517 [list] [network] PSII associated light-harvesting complex II  (7 genes)  IDA  
GO:0009522 [list] [network] photosystem I  (17 genes)  IDA  
GO:0009523 [list] [network] photosystem II  (29 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA IDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (21 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_001325794.1  NP_189406.1 
BLAST NP_001325794.1  NP_189406.1 
Orthologous [Ortholog page] LOC543256 (tae)  CAB4 (sly)  CAB5 (sly)  LOC547819 (gma)  CAB3 (gma)  LHCB2.2 (ath)  LHCB2.1 (ath)  LHB1B2 (ath)  LHB1B1 (ath)  CAB3 (ath)  CAB2 (ath)  CAB1 (ath)  LOC4324599 (osa)  LOC4324705 (osa)  LOC4333359 (osa)  LOC4346803 (osa)  LOC7455996 (ppo)  LOC7471832 (ppo)  LOC7481433 (ppo)  LOC7489858 (ppo)  LOC7493970 (ppo)  LOC7493971 (ppo)  LOC11414909 (mtr)  LOC11427672 (mtr)  LOC11434875 (mtr)  LOC25493394 (mtr)  LOC25495304 (mtr)  LOC25495305 (mtr)  LOC25495306 (mtr)  LOC100682487 (tae)  LOC100793702 (gma)  LOC100799813 (gma)  LHCB1-7 (gma)  LOC100805310 (gma)  LOC100815789 (gma)  LOC101245729 (sly)  LOC101263969 (sly)  LOC101264286 (sly)  CAB1B (sly)  LOC101265886 (sly)  CBP1 (sly)  LOC101267774 (sly)  LOC103828916 (bra)  LOC103828920 (bra)  LOC103835251 (bra)  LOC103837002 (bra)  LOC103840451 (bra)  LOC103854220 (bra)  LOC103857533 (bra)  LOC103860327 (bra)  LOC103865334 (bra)  LOC103867454 (bra)  LOC103867457 (bra)  LOC103875194 (bra)  Cab-1D (sly)  Cab-1A (sly)  Cab-3C (sly)  CBP2 (sly)  LOC123060502 (tae)  LOC123065880 (tae)  LOC123065889 (tae)  LOC123065910 (tae)  LOC123065922 (tae)  LOC123068639 (tae)  LOC123068673 (tae)  LOC123104562 (tae)  LOC123105512 (tae)  LOC123105513 (tae)  LOC123112836 (tae)  LOC123113017 (tae)  LOC123113816 (tae)  LOC123113817 (tae)  LOC123113818 (tae)  LOC123113821 (tae)  LOC123122327 (tae)  LOC123122527 (tae)  LOC123123324 (tae)  LOC123123325 (tae)  LOC123123326 (tae)  LOC123132049 (tae)  LOC123132051 (tae)  LOC123132053 (tae)  LOC123132054 (tae)  LOC123132056 (tae)  LOC123136082 (tae)  LOC123136085 (tae)  LOC123137522 (tae)  LOC123137523 (tae)  LOC123143417 (tae)  LOC123143588 (tae)  LOC123143591 (tae)  LOC123146389 (tae)  LOC123146452 (tae)  LOC123152634 (tae)  LOC123160302 (tae)  LOC123163221 (tae)  LOC123168972 (tae)  LOC123169666 (tae)  LOC123175700 (tae)  LOC123182417 (tae)  LOC123182881 (tae)  LOC123182882 (tae)  LOC123182883 (tae)  LOC123183162 (tae)  LOC123400105 (hvu)  LOC123403763 (hvu)  LOC123403764 (hvu)  LOC123404210 (hvu)  LOC123411532 (hvu)  LOC123412762 (hvu)  LOC123412763 (hvu)  LOC123447768 (hvu)  LOC123450698 (hvu)  LOC123451888 (hvu) 
Subcellular
localization
wolf
chlo 4,  mito 1,  extr 1,  vacu 1,  nucl 1,  E.R. 1,  golg 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001325794.1)
chlo 6,  nucl 1,  mito 1,  extr 1,  golg 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_189406.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_001325794.1)
chlo 8  (predict for NP_189406.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 8
ath04075 Plant hormone signal transduction 3
ath00860 Porphyrin metabolism 2
Genes directly connected with LHCB2.3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.6 LHCB2.2 photosystem II light harvesting complex protein 2.2 [detail] 815055
13.4 LHCB4.2 light harvesting complex photosystem II [detail] 820043
12.1 LHCB2.1 photosystem II light harvesting complex protein 2.1 [detail] 815058
9.6 AT5G48490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 834905
5.2 AT1G13650 uncharacterized protein [detail] 837926
5.0 GH3.9 putative indole-3-acetic acid-amido synthetase GH3.9 [detail] 819387
4.4 PORA protochlorophyllide oxidoreductase A [detail] 835507
Coexpressed
gene list		 [Coexpressed gene list for LHCB2.3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258239_at
258239_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258239_at
258239_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258239_at
258239_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822391      
Refseq ID (protein) NP_001325794.1 
NP_189406.1 


The preparation time of this page was 0.2 [sec].