[][] ath   At3g27750 Gene
functional annotation
Function   PPR containing protein
GO BP
GO:0000373 [list] [network] Group II intron splicing  (27 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:1990825 [list] [network] sequence-specific mRNA binding  (4 genes)  IDA  
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  ISS  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG
Protein NP_189412.1 
BLAST NP_189412.1 
Orthologous [Ortholog page] LOC4324089 (osa)LOC7483539 (ppo)LOC11435008 (mtr)LOC100788379 (gma)LOC100799612 (gma)LOC101267975 (sly)LOC103863790 (bra)LOC123058081 (tae)LOC123065098 (tae)LOC123074243 (tae)LOC123077667 (tae)LOC123439584 (hvu)
Subcellular
localization
wolf
chlo 8,  vacu 1,  E.R._vacu 1  (predict for NP_189412.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_189412.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB3123 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.1 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein [detail] 820508
6.0 PPD5 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 831016
5.9 AT1G54310 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 841872
Coexpressed
gene list
[Coexpressed gene list for EMB3123]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258232_at
258232_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258232_at
258232_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
258232_at
258232_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 822397    
Refseq ID (protein) NP_189412.1 


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