[←][→] ath   At3g28220 Gene
functional annotation
Function   TRAF-like family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009308 [list] [network] amine metabolic process  (122 genes)  IEA  
GO:1901605 [list] [network] alpha-amino acid metabolic process  (278 genes)  IEA  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEA  
GO:0022607 [list] [network] cellular component assembly  (625 genes)  IEA  
GO:0019748 [list] [network] secondary metabolic process  (766 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_189462.1 
BLAST NP_189462.1 
Orthologous [Ortholog page] AT2G04170 (ath)  AT2G04190 (ath)  AT2G15710 (ath)  AT2G32870 (ath)  AT2G32880 (ath)  AT3G17380 (ath)  AT3G20360 (ath)  AT3G20370 (ath)  AT3G20380 (ath)  AT3G22080 (ath)  AT3G46190 (ath)  AT4G09770 (ath)  AT4G09780 (ath)  AT4G00780 (ath)  AT4G01390 (ath)  AT5G26260 (ath)  AT5G26280 (ath)  AT5G26290 (ath)  AT5G26300 (ath)  AT5G26320 (ath)  ZW9 (ath)  AT1G65050 (ath)  AT1G65150 (ath)  AT1G65370 (ath)  AT1G69650 (ath)  AT1G69660 (ath)  LOC7454235 (ppo)  LOC7487422 (ppo)  LOC7490848 (ppo)  LOC7491905 (ppo)  LOC7496602 (ppo)  LOC11436579 (mtr)  LOC11443727 (mtr)  LOC18094066 (ppo)  LOC18101265 (ppo)  LOC18105139 (ppo)  LOC18109517 (ppo)  AT3G22085 (ath)  LOC100779090 (gma)  LOC100781145 (gma)  LOC100809118 (gma)  LOC100818875 (gma)  LOC101255192 (sly)  LOC103830743 (bra)  LOC103830920 (bra)  LOC103830921 (bra)  LOC103831369 (bra)  LOC103831446 (bra)  LOC103831447 (bra)  LOC103831833 (bra)  LOC103834883 (bra)  LOC103836843 (bra)  LOC103836896 (bra)  LOC103837118 (bra)  LOC103837119 (bra)  LOC103837120 (bra)  LOC103846987 (bra)  LOC103849485 (bra)  LOC103849486 (bra)  LOC103849544 (bra)  LOC103852600 (bra)  LOC103852604 (bra)  LOC103854707 (bra)  LOC103854708 (bra)  LOC103857469 (bra)  LOC103859707 (bra)  LOC103859851 (bra)  LOC103859852 (bra)  LOC103859853 (bra)  LOC103859854 (bra)  LOC103859856 (bra)  LOC103860082 (bra)  LOC103860209 (bra)  LOC103864488 (bra)  LOC103867605 (bra)  LOC103869124 (bra)  LOC103869330 (bra)  LOC103874461 (bra)  LOC112324079 (ppo)  LOC112324704 (ppo)  LOC117134080 (bra)  LOC123169561 (tae) 
Subcellular
localization
wolf
cyto 4,  nucl 1,  E.R. 1,  golg 1,  plas 1,  vacu 1,  cysk_nucl 1  (predict for NP_189462.1)
Subcellular
localization
TargetP
other 9  (predict for NP_189462.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G28220 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.9 AT1G52000 Mannose-binding lectin superfamily protein [detail] 841629
11.7 BGLU18 beta glucosidase 18 [detail] 841670
10.2 MBP1 myrosinase-binding protein 1 [detail] 841633
9.1 AT5G02940 ion channel POLLUX-like protein, putative (DUF1012) [detail] 831426
9.1 PGL5 6-phosphogluconolactonase 5 [detail] 832513
7.6 ATCSLA15 Nucleotide-diphospho-sugar transferases superfamily protein [detail] 826972
7.5 CORI3 Tyrosine transaminase family protein [detail] 828460
6.9 ARGAH2 Arginase/deacetylase superfamily protein [detail] 826458
6.8 AT3G28270 transmembrane protein, putative (DUF677) [detail] 822453
4.2 AT4G22755 methylsterol monooxygenase 1-3 [detail] 28720173
4.1 AT14A transmembrane protein, putative (DUF677) [detail] 822455
4.0 AT14A transmembrane protein, putative (DUF677) [detail] 822457
Coexpressed
gene list		 [Coexpressed gene list for AT3G28220]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256577_at
256577_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256577_at
256577_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256577_at
256577_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822448      
Refseq ID (protein) NP_189462.1 


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