ATTED-II : GeneID search result

[←][→] ath AT3G28760 Gene

functional annotation

Function

3-dehydroquinate synthase

GO BP

GO:0009073 [list] [network] aromatic amino acid family biosynthetic process	(59 genes)	IEA
GO:0055114 [list] [network] oxidation-reduction process	(1468 genes)	IEA

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

ISM

GO MF

GO:0003856 [list] [network] 3-dehydroquinate synthase activity	(2 genes)	IEA
GO:0016491 [list] [network] oxidoreductase activity	(1435 genes)	IEA

KEGG

Protein

NP_001030791.1 NP_189518.2

BLAST

NP_001030791.1 NP_189518.2

Orthologous

[Ortholog page] LOC4331771 (osa) LOC11419834 (mtr) LOC100262957 (vvi) LOC100279998 (zma) LOC100806285 (gma) LOC101252666 (sly) LOC103875132 (bra)

Subcellular
localization
wolf

chlo 6, chlo_mito 4, vacu 1, mito 1	(predict for NP_001030791.1)
chlo 9, chlo_mito 5	(predict for NP_189518.2)

Subcellular
localization
TargetP

other 3, chlo 3	(predict for NP_001030791.1)
chlo 7	(predict for NP_189518.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	3
ath00500	Starch and sucrose metabolism	2

Genes directly connected with AT3G28760 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.9	LSF2	dual specificity protein phosphatase (DsPTP1) family protein	[detail]	820265
5.6	GYRB1	DNA gyrase subunit B	[detail]	820189
5.1	AT3G13226	regulatory protein RecX family protein	[detail]	820518

Coexpressed
gene list

[Coexpressed gene list for AT3G28760]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256585_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256585_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256585_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	822508
Refseq ID (protein)	NP_001030791.1
Refseq ID (protein)	NP_189518.2

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