ATTED-II : GeneID search result

[←][→] ath AT3G28860 Gene

functional annotation

Function

ATP binding cassette subfamily B19

GO BP

GO:0010541 [list] [network] acropetal auxin transport	(3 genes)	IMP
GO:0043481 [list] [network] anthocyanin accumulation in tissues in response to UV light	(5 genes)	IMP
GO:0090691 [list] [network] formation of plant organ boundary	(16 genes)	IMP
GO:0010540 [list] [network] basipetal auxin transport	(19 genes)	IMP
GO:0008361 [list] [network] regulation of cell size	(27 genes)	IMP
GO:0009958 [list] [network] positive gravitropism	(36 genes)	IMP
GO:0010218 [list] [network] response to far red light	(54 genes)	IMP
GO:0009926 [list] [network] auxin polar transport	(66 genes)	IMP
GO:0009640 [list] [network] photomorphogenesis	(71 genes)	IMP
GO:0060918 [list] [network] auxin transport	(75 genes)	IMP
GO:0009637 [list] [network] response to blue light	(98 genes)	IMP
GO:0048443 [list] [network] stamen development	(101 genes)	IGI
GO:0048527 [list] [network] lateral root development	(117 genes)	IMP
GO:0009734 [list] [network] auxin-activated signaling pathway	(196 genes)	IEA
GO:0009639 [list] [network] response to red or far red light	(215 genes)	IMP
GO:0009733 [list] [network] response to auxin	(407 genes)	IMP
GO:0048364 [list] [network] root development	(482 genes)	IMP
GO:0055085 [list] [network] transmembrane transport	(778 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IBA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0010329 [list] [network] auxin efflux transmembrane transporter activity	(18 genes)	IDA
GO:0042626 [list] [network] ATPase-coupled transmembrane transporter activity	(186 genes)	IBA ISS
GO:0016887 [list] [network] ATPase activity	(507 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

ath02010 [list] [network] ABC transporters (26 genes)

Protein

NP_189528.1

BLAST

NP_189528.1

Orthologous

[Ortholog page] LOC4336042 (osa) LOC4337173 (osa) LOC7495965 (ppo) LOC25495295 (mtr) LOC100262734 (vvi) MDR1 (sly) LOC100383541 (zma) LOC100780618 (gma) LOC100797124 (gma) LOC103642112 (zma) LOC103645864 (zma) LOC103837035 (bra) LOC103875124 (bra)

Subcellular
localization
wolf

plas 8, E.R. 2

(predict for NP_189528.1)

Subcellular
localization
TargetP

other 9

(predict for NP_189528.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2

Genes directly connected with ABCB19 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.1	LNG1	longifolia1	[detail]	831411
6.9	DGR2	transmembrane protein, putative (Protein of unknown function, DUF642)	[detail]	832620
6.7	AT1G52190	Major facilitator superfamily protein	[detail]	841649
6.3	IQD18	IQ-domain 18	[detail]	839394
5.7	XYL1	alpha-xylosidase 1	[detail]	843185
5.4	PHYA	phytochrome A	[detail]	837483
5.2	AT2G25050	actin-binding FH2 (formin 2) family protein	[detail]	817043
5.1	BSK5	kinase with tetratricopeptide repeat domain-containing protein	[detail]	836018
5.0	ABCB1	ATP binding cassette subfamily B1	[detail]	818265
4.9	SPPL2	SIGNAL PEPTIDE PEPTIDASE-LIKE 2	[detail]	842673

Coexpressed
gene list

[Coexpressed gene list for ABCB19]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257137_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257137_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257137_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	822519
Refseq ID (protein)	NP_189528.1

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