[←][→] ath   At3g29100 Gene
functional annotation
Function   vesicle transport V-snare 13      
GO BP
GO:0051222 [list] [network] positive regulation of protein transport  (5 genes)  IMP  
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (9 genes)  TAS  
GO:0080147 [list] [network] root hair cell development  (110 genes)  IMP  
GO:0009664 [list] [network] plant-type cell wall organization  (180 genes)  IMP  
GO CC
GO:0031901 [list] [network] early endosome membrane  (5 genes)  IDA  
GO:0010008 [list] [network] endosome membrane  (52 genes)  IDA  
GO:0009705 [list] [network] plant-type vacuole membrane  (112 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0000149 [list] [network] SNARE binding  (10 genes)  TAS  
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (47 genes)
Protein NP_001189997.1  NP_001327542.1  NP_001327543.1  NP_001327544.1  NP_189554.2 
BLAST NP_001189997.1  NP_001327542.1  NP_001327543.1  NP_001327544.1  NP_189554.2 
Orthologous [Ortholog page] SGR4 (ath)  VTI1B (ath)  LOC4327678 (osa)  LOC7480581 (ppo)  LOC7492914 (ppo)  LOC7495993 (ppo)  LOC7498189 (ppo)  LOC11412506 (mtr)  LOC11416325 (mtr)  LOC11422160 (mtr)  LOC25488812 (mtr)  LOC100500007 (gma)  LOC100527319 (gma)  LOC100801744 (gma)  LOC100815385 (gma)  LOC100816145 (gma)  LOC101266321 (sly)  LOC103829198 (bra)  LOC103837204 (bra)  LOC103849621 (bra)  LOC104647326 (sly)  LOC112325916 (ppo)  LOC123061759 (tae)  LOC123065305 (tae)  LOC123070413 (tae)  LOC123078855 (tae)  LOC123142906 (tae)  LOC123444230 (hvu)  LOC123448155 (hvu) 
Subcellular
localization
wolf
cyto 6,  golg 2,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1  (predict for NP_001189997.1)
cyto 6,  golg 2,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1  (predict for NP_001327542.1)
cyto 6,  golg 2,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1  (predict for NP_001327543.1)
golg 4,  cyto 2,  golg_plas 2,  chlo 1,  cyto_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001327544.1)
cyto 3,  golg 3,  cyto_E.R. 2,  plas 1,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_189554.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001189997.1)
other 7  (predict for NP_001327542.1)
other 7  (predict for NP_001327543.1)
other 7  (predict for NP_001327544.1)
scret 5,  other 3  (predict for NP_189554.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
Genes directly connected with VTI13 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 VDAC5 voltage dependent anion channel 5 [detail] 824154
6.8 AT2G17975 zinc finger (Ran-binding) family protein [detail] 816309
6.6 AT3G02300 Regulator of chromosome condensation (RCC1) family protein [detail] 821167
5.3 UREF urease accessory protein F [detail] 838786
5.1 CNX3 cofactor of nitrate reductase and xanthine dehydrogenase 3 [detail] 839445
4.3 AT2G42365 [detail] 5007954
Coexpressed
gene list		 [Coexpressed gene list for VTI13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258191_at
258191_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258191_at
258191_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258191_at
258191_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822557      
Refseq ID (protein) NP_001189997.1 
NP_001327542.1 
NP_001327543.1 
NP_001327544.1 
NP_189554.2 


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