ATTED-II : GeneID search result

[←][→] ath At3g29230 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO:0006778 [list] [network] porphyrin-containing compound metabolic process	(217 genes)	IEA
GO:0042592 [list] [network] homeostatic process	(461 genes)	IEA
GO:0009416 [list] [network] response to light stimulus	(1981 genes)	IEA

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

ISM

GO MF

GO:0003729 [list] [network] mRNA binding

(1535 genes)

IDA

KEGG

Protein

NP_189568.1

BLAST

NP_189568.1

Orthologous

[Ortholog page] LOC7463054 (ppo) LOC9270050 (osa) LOC11418425 (mtr) LOC100782677 (gma) LOC100797216 (gma) LOC101268821 (sly) LOC103875093 (bra) LOC112323215 (ppo) LOC123102450 (tae) LOC123110625 (tae) LOC123119650 (tae) LOC123398135 (hvu)

Subcellular
localization
wolf

chlo 6, mito 3, cyto_mito 2

(predict for NP_189568.1)

Subcellular
localization
TargetP

mito 4

(predict for NP_189568.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT3G29230 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.8	AT4G30825	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	829206
6.9	AT5G52010	C2H2-like zinc finger protein	[detail]	835276
6.8	MEE40	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	824537

Coexpressed
gene list

[Coexpressed gene list for AT3G29230]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257744_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257744_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257744_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	822578
Refseq ID (protein)	NP_189568.1

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