ATTED-II : GeneID search result

[←][→] ath AT3G43540 Gene

functional annotation

Function

initiation factor 4F subunit (DUF1350)

GO BP

GO:0006413 [list] [network] translational initiation

(95 genes)

IEA

GO CC

GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM
GO:0009507 [list] [network] chloroplast	(5095 genes)	IDA ISM

GO MF

GO:0003743 [list] [network] translation initiation factor activity

(95 genes)

IEA

KEGG

Protein

NP_189940.1 NP_974379.1

BLAST

NP_189940.1 NP_974379.1

Orthologous

[Ortholog page] LOC4347153 (osa) LOC7491972 (ppo) LOC25481975 (mtr) LOC100257842 (vvi) LOC100275401 (zma) LOC100799131 (gma) LOC101256996 (sly) LOC103848032 (bra)

Subcellular
localization
wolf

chlo 10	(predict for NP_189940.1)
cyto 4, plas 2, cyto_nucl 2, E.R._plas 2, E.R. 1, cyto_pero 1	(predict for NP_974379.1)

Subcellular
localization
TargetP

mito 3, chlo 3	(predict for NP_189940.1)
scret 9	(predict for NP_974379.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	2

Genes directly connected with AT3G43540 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.1	AT5G22620	phosphoglycerate/bisphosphoglycerate mutase family protein	[detail]	832325
6.0	AT3G43520	Transmembrane proteins 14C	[detail]	823438
5.7	AT5G27560	DUF1995 domain protein, putative (DUF1995)	[detail]	832816

Coexpressed
gene list

[Coexpressed gene list for AT3G43540]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252724_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252724_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252724_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	823446
Refseq ID (protein)	NP_189940.1
Refseq ID (protein)	NP_974379.1

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