ATTED-II : GeneID search result

[←][→] ath AT3G44540 Gene

functional annotation

Function

fatty acid reductase 4

GO BP

GO:0035336 [list] [network] long-chain fatty-acyl-CoA metabolic process	(8 genes)	IBA
GO:0010345 [list] [network] suberin biosynthetic process	(18 genes)	IBA IMP
GO:0009611 [list] [network] response to wounding	(212 genes)	IMP
GO:0009651 [list] [network] response to salt stress	(485 genes)	IEP
GO:0006629 [list] [network] lipid metabolic process	(947 genes)	IEA
GO:0055114 [list] [network] oxidation-reduction process	(1468 genes)	IDA IEA

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

ISM

GO MF

GO:0050062 [list] [network] long-chain-fatty-acyl-CoA reductase activity	(3 genes)	IDA
GO:0102965 [list] [network] alcohol-forming fatty acyl-CoA reductase activity	(8 genes)	IEA
GO:0080019 [list] [network] fatty-acyl-CoA reductase (alcohol-forming) activity	(9 genes)	IBA

KEGG

ath00073 [list] [network] Cutin, suberine and wax biosynthesis (31 genes)

ath04146 [list] [network] Peroxisome (87 genes)

Protein

NP_001319682.1 NP_001327210.1 NP_190040.3

BLAST

NP_001319682.1 NP_001327210.1 NP_190040.3

Orthologous

[Ortholog page] FAR5 (ath) FAR8 (ath) CER4 (ath) FAR7 (ath) FAR1 (ath) LOC4346301 (osa) LOC4347887 (osa) LOC7474947 (ppo) LOC7479040 (ppo) LOC9267826 (osa) LOC11406049 (mtr) LOC11417173 (mtr) LOC11425913 (mtr) LOC11444553 (mtr) LOC11446356 (mtr) LOC25492296 (mtr) LOC100254606 (vvi) LOC100259719 (vvi) LOC100285021 (zma) LOC100501369 (zma) LOC100787403 (gma) LOC100788680 (gma) LOC100788994 (gma) LOC100789566 (gma) LOC100793197 (gma) LOC100793736 (gma) LOC100798338 (gma) LOC100805240 (gma) LOC100805776 (gma) LOC101250126 (sly) LOC101255165 (sly) LOC101255436 (sly) LOC101255461 (sly) LOC103834459 (bra) LOC103844166 (bra) LOC103845537 (bra) LOC103845550 (bra) LOC103851446 (bra) LOC103856516 (bra) LOC103873613 (bra) LOC103873656 (bra) LOC107276319 (osa)

Subcellular
localization
wolf

cyto 8, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001319682.1)
cyto 8, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001327210.1)
cyto 8, chlo 1, nucl 1, plas 1, nucl_plas 1	(predict for NP_190040.3)

Subcellular
localization
TargetP

other 7	(predict for NP_001319682.1)
other 7	(predict for NP_001327210.1)
other 7	(predict for NP_190040.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath04146	Peroxisome	2
ath00940	Phenylpropanoid biosynthesis	2

Genes directly connected with FAR4 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.9	AT1G68850	Peroxidase superfamily protein	[detail]	843218
11.1	FAR5	fatty acid reductase 5	[detail]	823580
9.8	AT5G09480	hydroxyproline-rich glycoprotein family protein	[detail]	830807
9.5	AT5G14130	Peroxidase superfamily protein	[detail]	831263

Coexpressed
gene list

[Coexpressed gene list for FAR4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252638_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252638_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252638_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	823579
Refseq ID (protein)	NP_001319682.1
	NP_001327210.1
	NP_190040.3

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