ATTED-II : GeneID search result

[←][→] ath At3g44540 Gene

functional annotation

Function

fatty acid reductase 4

GO BP

GO:0010345 [list] [network] suberin biosynthetic process	(17 genes)	IMP
GO:0009651 [list] [network] response to salt stress	(607 genes)	IEP
GO:0009611 [list] [network] response to wounding	(816 genes)	IMP

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

ISM

GO MF

GO:0050062 [list] [network] long-chain-fatty-acyl-CoA reductase activity

(3 genes)

IDA

KEGG

ath00073 [list] [network] Cutin, suberine and wax biosynthesis (37 genes)

ath04146 [list] [network] Peroxisome (88 genes)

Protein

NP_001319682.1 NP_001327210.1 NP_190040.3

BLAST

NP_001319682.1 NP_001327210.1 NP_190040.3

Orthologous

[Ortholog page] LOC543003 (tae) LOC543004 (tae) LOC543440 (tae) FAR5 (ath) FAR8 (ath) CER4 (ath) FAR1 (ath) LOC4346301 (osa) LOC4347887 (osa) LOC7474947 (ppo) LOC7474948 (ppo) LOC7479040 (ppo) LOC7479041 (ppo) LOC9267826 (osa) LOC11406049 (mtr) LOC11417173 (mtr) LOC11423429 (mtr) LOC11425913 (mtr) LOC11444553 (mtr) LOC11446356 (mtr) LOC11446357 (mtr) LOC11446986 (mtr) LOC18108458 (ppo) LOC18108459 (ppo) LOC25492296 (mtr) LOC100787403 (gma) LOC100788680 (gma) LOC100788994 (gma) LOC100789566 (gma) LOC100793197 (gma) LOC100793736 (gma) LOC100798338 (gma) LOC100805240 (gma) LOC100805776 (gma) LOC101249557 (sly) LOC101250126 (sly) LOC101254867 (sly) LOC101255165 (sly) LOC101255436 (sly) LOC101255461 (sly) LOC103834459 (bra) LOC103844166 (bra) LOC103845537 (bra) LOC103851446 (bra) LOC103873613 (bra) LOC103873656 (bra) LOC107276319 (osa) LOC123057499 (tae) LOC123057506 (tae) LOC123064280 (tae) LOC123064285 (tae) LOC123073614 (tae) LOC123076772 (tae) LOC123082995 (tae) LOC123087393 (tae) LOC123090527 (tae) LOC123099090 (tae) LOC123116284 (tae) LOC123150898 (tae) LOC123152179 (tae) LOC123152925 (tae) LOC123155785 (tae) LOC123162434 (tae) LOC123163830 (tae) LOC123165984 (tae) LOC123166575 (tae) LOC123172362 (tae) LOC123399671 (hvu) LOC123403056 (hvu) LOC123403257 (hvu) LOC123409980 (hvu) LOC123412496 (hvu) LOC123412817 (hvu) LOC123413046 (hvu) LOC123421713 (hvu) LOC123431372 (hvu) LOC123439144 (hvu) LOC123442393 (hvu) LOC123442394 (hvu) LOC123446864 (hvu) LOC123449948 (hvu) LOC123450955 (hvu)

Subcellular
localization
wolf

cyto 8, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001319682.1)
cyto 8, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001327210.1)
cyto 8, chlo 1, nucl 1, plas 1, nucl_plas 1	(predict for NP_190040.3)

Subcellular
localization
TargetP

other 7	(predict for NP_001319682.1)
other 7	(predict for NP_001327210.1)
other 7	(predict for NP_190040.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath00940	Phenylpropanoid biosynthesis	3
ath04146	Peroxisome	2
ath02010	ABC transporters	2

Genes directly connected with FAR4 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
12.0	AT1G68850	Peroxidase superfamily protein	[detail]	843218
10.5	FAR5	fatty acid reductase 5	[detail]	823580
9.7	AT2G18370	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein	[detail]	816352
9.3	AT5G14130	Peroxidase superfamily protein	[detail]	831263

Coexpressed
gene list

[Coexpressed gene list for FAR4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252638_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252638_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252638_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	823579
Refseq ID (protein)	NP_001319682.1
	NP_001327210.1
	NP_190040.3

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