[←][→] ath   At3g45140 Gene
functional annotation
Function   lipoxygenase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010597 [list] [network] green leaf volatile biosynthetic process  (3 genes)  IMP  
GO:0080027 [list] [network] response to herbivore  (17 genes)  IEP  
GO:0009695 [list] [network] jasmonic acid biosynthetic process  (26 genes)  IMP TAS  
GO:0034440 [list] [network] lipid oxidation  (39 genes)  IDA  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEP  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  TAS  
GO:0009617 [list] [network] response to bacterium  (1192 genes)  IEP  
GO:0051707 [list] [network] response to other organism  (2416 genes)  TAS  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM ISS TAS  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0016165 [list] [network] linoleate 13S-lipoxygenase activity  (4 genes)  IDA  
GO:1901149 [list] [network] salicylic acid binding  (28 genes)  HDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00591 [list] [network] Linoleic acid metabolism (9 genes)
ath00592 [list] [network] alpha-Linolenic acid metabolism (43 genes)
Protein NP_001326504.1  NP_566875.1 
BLAST NP_001326504.1  NP_566875.1 
Orthologous [Ortholog page] loxC (sly)  LOC4328603 (osa)  LOC4345993 (osa)  LOC4345994 (osa)  LOC4352505 (osa)  LOC4352509 (osa)  LOC7489299 (ppo)  LOC7496048 (ppo)  LOC7496049 (ppo)  LOC7496589 (ppo)  LOC11442192 (mtr)  LOC11443018 (mtr)  LOC18094302 (ppo)  LOC18109826 (ppo)  LOC25491116 (mtr)  LOC25492621 (mtr)  loxF (sly)  LOC100782277 (gma)  LOC100786646 (gma)  LOC100787202 (gma)  LOC100795276 (gma)  LOC100797626 (gma)  LOC100809699 (gma)  LOC101262081 (sly)  LOC103830390 (bra)  LOC103830993 (bra)  LOC103830994 (bra)  LOC103830995 (bra)  LOC103830997 (bra)  LOC103852169 (bra)  LOC106794093 (gma)  LOC123101959 (tae)  LOC123110078 (tae)  LOC123119080 (tae)  LOC123132647 (tae)  LOC123136741 (tae)  LOC123144225 (tae)  LOC123152042 (tae)  LOC123159032 (tae)  LOC123169172 (tae)  LOC123395664 (hvu)  LOC123401613 (hvu)  LOC123406258 (hvu)  LOC123410068 (hvu)  LOC123412610 (hvu) 
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for NP_001326504.1)
chlo 9  (predict for NP_566875.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001326504.1)
chlo 7  (predict for NP_566875.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 5
Genes directly connected with LOX2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.7 CORI3 Tyrosine transaminase family protein [detail] 828460
11.4 AT5G02940 ion channel POLLUX-like protein, putative (DUF1012) [detail] 831426
9.3 ARGAH2 Arginase/deacetylase superfamily protein [detail] 826458
8.2 AOC2 allene oxide cyclase 2 [detail] 822168
8.0 HPL1 hydroperoxide lyase 1 [detail] 827215
6.5 AOC1 allene oxide cyclase 1 [detail] 822167
4.8 JMT jasmonic acid carboxyl methyltransferase [detail] 838551
Coexpressed
gene list		 [Coexpressed gene list for LOX2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252618_at
252618_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252618_at
252618_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252618_at
252618_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823650      
Refseq ID (protein) NP_001326504.1 
NP_566875.1 


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