ATTED-II : GeneID search result

[←][→] ath AT3G45980 Gene

functional annotation

Function

Histone superfamily protein

GO BP

GO:0006334 [list] [network] nucleosome assembly

(34 genes)

IBA

GO CC

GO:0000786 [list] [network] nucleosome	(45 genes)	IEA
GO:0009534 [list] [network] chloroplast thylakoid	(474 genes)	IDA
GO:0005730 [list] [network] nucleolus	(477 genes)	IDA
GO:0009570 [list] [network] chloroplast stroma	(750 genes)	IDA
GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0046982 [list] [network] protein heterodimerization activity	(122 genes)	IEA
GO:0003677 [list] [network] DNA binding	(2280 genes)	IBA

KEGG

Protein

NP_190184.1

BLAST

NP_190184.1

Orthologous

[Ortholog page] LOC542301 (zma) H2B-1 (sly) AT2G28720 (ath) AT2G37470 (ath) AT3G09480 (ath) HTB11 (ath) AT5G02570 (ath) HTB2 (ath) HTB4 (ath) HTB1 (ath) AT1G08170 (ath) LOC4324495 (osa) LOC4324500 (osa) LOC4324502 (osa) LOC4324504 (osa) LOC4324510 (osa) LOC4324512 (osa) LOC4327384 (osa) LOC4339681 (osa) LOC4345904 (osa) LOC7463471 (ppo) LOC9268195 (osa) LOC11416780 (mtr) LOC11417139 (mtr) LOC11426605 (mtr) LOC11431194 (mtr) LOC11432921 (mtr) LOC11442767 (mtr) LOC25484839 (mtr) LOC25485824 (mtr) LOC25492478 (mtr) LOC25492530 (mtr) LOC25492533 (mtr) LOC25492556 (mtr) LOC25492748 (mtr) LOC25493050 (mtr) AT3G53650 (ath) LOC100192792 (zma) LOC100193014 (zma) LOC100251955 (vvi) LOC100253395 (vvi) LOC100258812 (vvi) LOC100263369 (vvi) LOC100273491 (zma) LOC100273745 (zma) LOC100274083 (zma) LOC100305731 (gma) LOC100305866 (gma) LOC100499734 (gma) LOC100500314 (gma) LOC100501306 (zma) LOC100501458 (zma) LOC100501614 (zma) LOC100789702 (gma) LOC100793796 (gma) LOC100805396 (gma) LOC100806140 (gma) LOC100817849 (gma) LOC100820177 (gma) LOC101244346 (sly) LOC101245134 (sly) LOC101252186 (sly) LOC101253792 (sly) H2B-3 (sly) LOC101261496 (sly) LOC101264987 (sly) LOC101267024 (sly) LOC103639304 (zma) LOC103647254 (zma) LOC103647911 (zma) LOC103829764 (bra) LOC103829945 (bra) LOC103841289 (bra) LOC103845413 (bra) LOC103845511 (bra) LOC103849084 (bra) LOC103851535 (bra) LOC103856534 (bra) LOC103856593 (bra) LOC103858282 (bra) LOC103863386 (bra) LOC103864913 (bra) LOC103871565 (bra) LOC103873395 (bra) LOC104648016 (sly) LOC111828532 (gma)

Subcellular
localization
wolf

nucl 10

(predict for NP_190184.1)

Subcellular
localization
TargetP

other 9

(predict for NP_190184.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with HTB9 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
12.7	HTB11	Histone superfamily protein	[detail]	823746
11.6	AT3G53730	Histone superfamily protein	[detail]	824540
11.2	HTA6	histone H2A 6	[detail]	836109
10.1	H2AXA	Histone superfamily protein	[detail]	837409

Coexpressed
gene list

[Coexpressed gene list for HTB9]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252561_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252561_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252561_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	823741
Refseq ID (protein)	NP_190184.1

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