[←][→] ath   AT3G46590 Gene
functional annotation
Function   TRF-like 1  
GO BP
GO:0009739 [list] [network] response to gibberellin  (154 genes)  IEP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (297 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008301 [list] [network] DNA binding, bending  (2 genes)  IDA  
GO:0042162 [list] [network] telomeric DNA binding  (24 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001030821.1  NP_001030822.2  NP_001326037.1  NP_001326038.1  NP_190243.2 
BLAST NP_001030821.1  NP_001030822.2  NP_001326037.1  NP_001326038.1  NP_190243.2 
Orthologous [Ortholog page] LOC542426 (zma)  LOC542534 (zma)  TRFL9 (ath)  TBP1 (ath)  TRFL2 (ath)  LOC4332403 (osa)  LOC7465106 (ppo)  LOC7488113 (ppo)  LOC11417600 (mtr)  LOC11436475 (mtr)  LOC25489316 (mtr)  TBP1 (sly)  LOC100257090 (vvi)  LOC100259786 (vvi)  LOC100780881 (gma)  LOC100792533 (gma)  LOC100795471 (gma)  LOC100797436 (gma)  LOC100814318 (gma)  LOC100816121 (gma)  LOC101246932 (sly)  LOC101255102 (sly)  LOC101255981 (sly)  LOC103836437 (bra)  LOC103843940 (bra)  LOC103845457 (bra)  LOC103846538 (bra)  LOC103850900 (bra)  LOC103856034 (bra)  LOC103870245 (bra) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for NP_001030821.1)
nucl 7,  chlo 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for NP_001030822.2)
nucl 7,  chlo 1,  cyto 1,  cysk 1,  chlo_mito 1  (predict for NP_001326037.1)
nucl 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001326038.1)
nucl 7,  chlo 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for NP_190243.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001030821.1)
other 8  (predict for NP_001030822.2)
other 8  (predict for NP_001326037.1)
scret 4,  other 3  (predict for NP_001326038.1)
other 7  (predict for NP_190243.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRFL1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 TRP1 telomeric repeat binding protein 1 [detail] 836062
6.5 AT3G03790 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein [detail] 821145
5.6 RMA2 RING membrane-anchor 2 [detail] 828942
5.3 AT3G03870 transmembrane protein [detail] 821099
5.2 TRFL9 TRF-like 9 [detail] 820436
Coexpressed
gene list		 [Coexpressed gene list for TRFL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252504_at
252504_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252504_at
252504_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252504_at
252504_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823812      
Refseq ID (protein) NP_001030821.1 
NP_001030822.2 
NP_001326037.1 
NP_001326038.1 
NP_190243.2 


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