[←][→] ath   At3g46590 Gene
functional annotation
Function   TRF-like 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051172 [list] [network] negative regulation of nitrogen compound metabolic process  (349 genes)  IEA  
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO:0048364 [list] [network] root development  (1192 genes)  IEA  
GO:0050793 [list] [network] regulation of developmental process  (1250 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008301 [list] [network] DNA binding, bending  (2 genes)  IDA  
GO:0042162 [list] [network] telomeric DNA binding  (13 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001030821.1  NP_001030822.2  NP_001326037.1  NP_001326038.1  NP_190243.2 
BLAST NP_001030821.1  NP_001030822.2  NP_001326037.1  NP_001326038.1  NP_190243.2 
Orthologous [Ortholog page] TRFL9 (ath)  TBP1 (ath)  TRFL2 (ath)  LOC4332403 (osa)  LOC7458136 (ppo)  LOC7465106 (ppo)  LOC7467553 (ppo)  LOC7488113 (ppo)  LOC11417600 (mtr)  LOC11436475 (mtr)  LOC25489316 (mtr)  TBP1 (sly)  LOC100780881 (gma)  LOC100792533 (gma)  LOC100795471 (gma)  LOC100797436 (gma)  LOC100814318 (gma)  LOC100816121 (gma)  LOC101246932 (sly)  LOC101255102 (sly)  LOC101255981 (sly)  LOC103836437 (bra)  LOC103843940 (bra)  LOC103845457 (bra)  LOC103846538 (bra)  LOC103850900 (bra)  LOC103856034 (bra)  LOC103870245 (bra)  LOC123085443 (tae)  LOC123092603 (tae)  LOC123097910 (tae)  LOC123449022 (hvu) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for NP_001030821.1)
nucl 7,  chlo 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for NP_001030822.2)
nucl 7,  chlo 1,  cyto 1,  cysk 1,  chlo_mito 1  (predict for NP_001326037.1)
nucl 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001326038.1)
nucl 7,  chlo 1,  cyto 1,  plas 1,  chlo_mito 1,  cyto_plas 1  (predict for NP_190243.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001030821.1)
other 8  (predict for NP_001030822.2)
other 8  (predict for NP_001326037.1)
scret 4,  other 3  (predict for NP_001326038.1)
other 7  (predict for NP_190243.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRFL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 AT3G03790 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein [detail] 821145
6.2 TRP1 telomeric repeat binding protein 1 [detail] 836062
5.9 AT1G19000 Homeodomain-like superfamily protein [detail] 838481
5.8 TRFL9 TRF-like 9 [detail] 820436
4.6 AT2G32970 G1/S-specific cyclin-E protein [detail] 817859
Coexpressed
gene list		 [Coexpressed gene list for TRFL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252504_at
252504_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252504_at
252504_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252504_at
252504_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823812      
Refseq ID (protein) NP_001030821.1 
NP_001030822.2 
NP_001326037.1 
NP_001326038.1 
NP_190243.2 


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