[][] ath   AT3G46630 Gene
functional annotation
Function   DCL protein (DUF3223)
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IBA  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IBA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA ISM  
GO MF
KEGG
Protein NP_190247.1 
BLAST NP_190247.1 
Orthologous [Ortholog page] LOC4346400 (osa)LOC9268665 (osa)LOC25489911 (mtr)LOC100247085 (vvi)LOC100282044 (zma)LOC100282345 (zma)LOC100818770 (gma)LOC101246421 (sly)LOC103873382 (bra)LOC103873593 (bra)
Subcellular
localization
wolf
chlo_mito 5,  mito 5,  chlo 4,  cyto_mito 3  (predict for NP_190247.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_190247.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 6
ath00195 Photosynthesis 5
ath04712 Circadian rhythm - plant 3
Genes directly connected with AT3G46630 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.7 AT1G52220 CURVATURE THYLAKOID protein [detail] 841652
5.5 LHCA4 light-harvesting chlorophyll-protein complex I subunit A4 [detail] 823901
5.3 GI gigantea protein (GI) [detail] 838883
Coexpressed
gene list
[Coexpressed gene list for AT3G46630]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252481_at
252481_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252481_at
252481_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252481_at
252481_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 823816    
Refseq ID (protein) NP_190247.1 


The preparation time of this page was 0.2 [sec].