[←][→] ath   At3g47160 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001190025.1  NP_001327886.1  NP_190300.1 
BLAST NP_001190025.1  NP_001327886.1  NP_190300.1 
Orthologous [Ortholog page] AIRP2 (ath)  AT5G58787 (ath)  LOC4337424 (osa)  LOC4344184 (osa)  LOC7466068 (ppo)  LOC7467999 (ppo)  LOC7477415 (ppo)  LOC7481481 (ppo)  LOC7487314 (ppo)  LOC9269562 (osa)  LOC11410065 (mtr)  LOC11420407 (mtr)  LOC11424918 (mtr)  LOC18103005 (ppo)  LOC25493183 (mtr)  LOC100777318 (gma)  LOC100786183 (gma)  LOC100789769 (gma)  LOC100811330 (gma)  LOC100814293 (gma)  LOC100818286 (gma)  LOC100819267 (gma)  LOC101243841 (sly)  LOC101248144 (sly)  LOC103855416 (bra)  LOC103856664 (bra)  LOC103873258 (bra)  LOC123043842 (tae)  LOC123047232 (tae)  LOC123047442 (tae)  LOC123051712 (tae)  LOC123055241 (tae)  LOC123122972 (tae)  LOC123181223 (tae)  LOC123186609 (tae)  LOC123187627 (tae)  LOC123424871 (hvu)  LOC123428311 (hvu)  LOC123433081 (hvu) 
Subcellular
localization
wolf
cyto 8,  nucl 1,  mito 1,  pero 1  (predict for NP_001190025.1)
chlo 6,  extr 1,  cyto 1,  plas 1,  E.R. 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001327886.1)
cyto 7,  pero 1,  nucl 1,  mito 1  (predict for NP_190300.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for NP_001190025.1)
scret 9,  mito 3  (predict for NP_001327886.1)
other 7  (predict for NP_190300.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
Genes directly connected with AT3G47160 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.6 MEE14 maternal effect embryo arrest 14 [detail] 816085
7.6 AT4G14270 polyadenylate-binding protein interacting protein [detail] 827068
7.4 AT5G25210 uncharacterized protein [detail] 832592
7.2 AT2G46550 uncharacterized protein [detail] 819267
6.8 RD19 Papain family cysteine protease [detail] 830064
6.3 AT1G24440 RING/U-box superfamily protein [detail] 839060
6.0 SNRK2.3 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 [detail] 836822
5.7 GID1A alpha/beta-Hydrolases superfamily protein [detail] 819674
5.7 GID1C alpha/beta-Hydrolases superfamily protein [detail] 832790
5.6 HDA2 histone deacetylase 2 [detail] 832673
5.6 TLP11 tubby like protein 11 [detail] 831986
4.8 FHY1 far-red elongated hypocotyl 1 [detail] 5007942
Coexpressed
gene list		 [Coexpressed gene list for AT3G47160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252464_at
252464_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252464_at
252464_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252464_at
252464_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823869      
Refseq ID (protein) NP_001190025.1 
NP_001327886.1 
NP_190300.1 


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