[←][→] ath   AT3G47160 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001190025.1  NP_001327886.1  NP_190300.1 
BLAST NP_001190025.1  NP_001327886.1  NP_190300.1 
Orthologous [Ortholog page] AIRP2 (ath)  AT5G58787 (ath)  LOC4337424 (osa)  LOC4344184 (osa)  LOC4348743 (osa)  LOC7466068 (ppo)  LOC7477415 (ppo)  LOC7481481 (ppo)  LOC7487314 (ppo)  LOC9269562 (osa)  LOC11410065 (mtr)  LOC11420407 (mtr)  LOC11424918 (mtr)  LOC25493183 (mtr)  LOC100126941 (zma)  LOC100244841 (vvi)  LOC100261401 (vvi)  LOC100281234 (zma)  LOC100282914 (zma)  LOC100777318 (gma)  LOC100786183 (gma)  LOC100789769 (gma)  LOC100811330 (gma)  LOC100814293 (gma)  LOC100818286 (gma)  LOC100819267 (gma)  LOC101243841 (sly)  LOC101248144 (sly)  LOC103642202 (zma)  LOC103855416 (bra)  LOC103856664 (bra)  LOC103873258 (bra)  LOC104879530 (vvi)  LOC109942841 (zma) 
Subcellular
localization
wolf
cyto 8,  nucl 1,  mito 1,  pero 1  (predict for NP_001190025.1)
chlo 6,  extr 1,  cyto 1,  plas 1,  E.R. 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001327886.1)
cyto 7,  pero 1,  nucl 1,  mito 1  (predict for NP_190300.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for NP_001190025.1)
scret 9,  mito 3  (predict for NP_001327886.1)
other 7  (predict for NP_190300.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
Genes directly connected with AT3G47160 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 MEE14 maternal effect embryo arrest 14 [detail] 816085
7.2 AT4G14270 polyadenylate-binding protein interacting protein [detail] 827068
7.0 AT5G25210 hypothetical protein [detail] 832592
6.8 AT2G46550 transmembrane protein [detail] 819267
6.2 XERICO RING/U-box superfamily protein [detail] 814962
5.8 TLP11 tubby like protein 11 [detail] 831986
5.4 AT2G37480 hypothetical protein [detail] 818325
5.4 GID1A alpha/beta-Hydrolases superfamily protein [detail] 819674
5.2 FHY1 far-red elongated hypocotyl 1 [detail] 5007942
5.2 SNRK2.3 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 [detail] 836822
4.8 GID1C alpha/beta-Hydrolases superfamily protein [detail] 832790
Coexpressed
gene list		 [Coexpressed gene list for AT3G47160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252464_at
252464_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252464_at
252464_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252464_at
252464_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823869      
Refseq ID (protein) NP_001190025.1 
NP_001327886.1 
NP_190300.1 


The preparation time of this page was 0.2 [sec].