[←][→] ath   AT3G47460 Gene
functional annotation
Function   Structural maintenance of chromosomes (SMC) family protein  
GO BP
GO:0030261 [list] [network] chromosome condensation  (18 genes)  IEA  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IEA  
GO:0051301 [list] [network] cell division  (352 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (348 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO MF
GO:0022857 [list] [network] transmembrane transporter activity  (1151 genes)  ISS  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001325474.1  NP_190330.1 
BLAST NP_001325474.1  NP_190330.1 
Orthologous [Ortholog page] SMC2 (ath)  LOC4325020 (osa)  LOC25501067 (mtr)  LOC100245029 (vvi)  LOC100780995 (gma)  LOC100788674 (gma)  LOC101261897 (sly)  LOC103650874 (zma)  LOC103873240 (bra)  LOC103874675 (bra) 
Subcellular
localization
wolf
cyto 3,  vacu 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_001325474.1)
cyto 3,  vacu 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_190330.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001325474.1)
other 8  (predict for NP_190330.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATSMC2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.1 SMC2 structural maintenance of chromosomes 2 [detail] 836362
7.5 WYR inner centromere protein, ARK-binding region protein [detail] 835676
7.5 SMC3 structural maintenance of chromosome 3 [detail] 834917
Coexpressed
gene list		 [Coexpressed gene list for ATSMC2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252416_at
252416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252416_at
252416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252416_at
252416_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823900      
Refseq ID (protein) NP_001325474.1 
NP_190330.1 


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