[←][→] ath   At3g47460 Gene
functional annotation
Function   Structural maintenance of chromosomes (SMC) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (253 genes)  IEA  
GO:0022857 [list] [network] transmembrane transporter activity  (1006 genes)  ISS  
KEGG
Protein NP_001325474.1  NP_190330.1 
BLAST NP_001325474.1  NP_190330.1 
Orthologous [Ortholog page] SMC2 (ath)  LOC4325020 (osa)  LOC7479194 (ppo)  LOC7483261 (ppo)  LOC25501067 (mtr)  LOC100780995 (gma)  LOC100788674 (gma)  LOC101261897 (sly)  LOC103873240 (bra)  LOC103874675 (bra)  LOC123062811 (tae)  LOC123071654 (tae)  LOC123079995 (tae)  LOC123445020 (hvu) 
Subcellular
localization
wolf
cyto 3,  vacu 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_001325474.1)
cyto 3,  vacu 2,  cyto_nucl 2,  cyto_E.R. 2  (predict for NP_190330.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001325474.1)
other 8  (predict for NP_190330.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATSMC2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.5 SMC2 structural maintenance of chromosomes 2 [detail] 836362
8.4 WYR inner centromere protein, ARK-binding region protein [detail] 835676
8.3 SMC3 structural maintenance of chromosome 3 [detail] 834917
Coexpressed
gene list		 [Coexpressed gene list for ATSMC2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252416_at
252416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252416_at
252416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252416_at
252416_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823900      
Refseq ID (protein) NP_001325474.1 
NP_190330.1 


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