[←][→] ath   At3g47540 Gene
functional annotation
Function   Chitinase family protein      
GO BP
GO:0006032 [list] [network] chitin catabolic process  (8 genes)  IEA  
GO:0016998 [list] [network] cell wall macromolecule catabolic process  (25 genes)  IEA  
GO:0001666 [list] [network] response to hypoxia  (325 genes)  IEA  
GO:0019748 [list] [network] secondary metabolic process  (766 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO:0043436 [list] [network] oxoacid metabolic process  (1714 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO:0006952 [list] [network] defense response  (2370 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG ath00520 [list] [network] Amino sugar and nucleotide sugar metabolism (133 genes)
Protein NP_001190028.1  NP_190338.1 
BLAST NP_001190028.1  NP_190338.1 
Orthologous
Subcellular
localization
wolf
chlo 4,  extr 3,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001190028.1)
chlo 4,  extr 3,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_190338.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001190028.1)
scret 9  (predict for NP_190338.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04626 Plant-pathogen interaction 2
ath00940 Phenylpropanoid biosynthesis 2
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ath01230 Biosynthesis of amino acids 2
Genes directly connected with AT3G47540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.0 CNGC19 cyclic nucleotide gated channel 19 [detail] 821036
4.6 ADT4 arogenate dehydratase 4 [detail] 823601
4.6 PAD3 Cytochrome P450 superfamily protein [detail] 822298
4.3 TPPD Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 840493
3.3 PES2 Esterase/lipase/thioesterase family protein [detail] 822299
Coexpressed
gene list		 [Coexpressed gene list for AT3G47540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252421_at
252421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252421_at
252421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252421_at
252421_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823908      
Refseq ID (protein) NP_001190028.1 
NP_190338.1 


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