[←][→] ath   At3g47860 Gene
functional annotation
Function   chloroplastic lipocalin    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0046322 [list] [network] negative regulation of fatty acid oxidation  (2 genes)  IMP  
GO:1901562 [list] [network] response to paraquat  (5 genes)  IEP  
GO:0010117 [list] [network] photoprotection  (13 genes)  IDA  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IEP IMP  
GO:0010431 [list] [network] seed maturation  (91 genes)  IMP  
GO:0009408 [list] [network] response to heat  (287 genes)  IMP  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO MF
GO:0036094 [list] [network] small molecule binding  (782 genes)  IEA  
KEGG
Protein NP_190370.1 
BLAST NP_190370.1 
Orthologous [Ortholog page] LOC4337069 (osa)  LOC11429972 (mtr)  LOC18095938 (ppo)  CHL (gma)  LOC100814557 (gma)  LOC101260607 (sly)  LOC103873561 (bra)  LOC123046808 (tae)  LOC123054660 (tae)  LOC123190508 (tae)  LOC123427911 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_190370.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_190370.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath01230 Biosynthesis of amino acids 2
ath00730 Thiamine metabolism 2
Genes directly connected with CHL on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 PTAC17 plastid transcriptionally active 17 [detail] 844387
7.2 THIC thiaminC [detail] 817513
7.2 RIBA2 riboflavin biosynthesis protein [detail] 816777
Coexpressed
gene list		 [Coexpressed gene list for CHL]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252391_at
252391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252391_at
252391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252391_at
252391_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823942      
Refseq ID (protein) NP_190370.1 


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