[←][→] ath   At3g48110 Gene
functional annotation
Function   glycine-tRNA ligase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006426 [list] [network] glycyl-tRNA aminoacylation  (1 genes)  ISS  
GO:0045995 [list] [network] regulation of embryonic development  (14 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0004820 [list] [network] glycine-tRNA ligase activity  (3 genes)  ISS  
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  ISS  
KEGG ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (199 genes)
Protein NP_190394.3 
BLAST NP_190394.3 
Orthologous [Ortholog page] RA1 (osa)  LOC7486786 (ppo)  LOC25500059 (mtr)  LOC100787365 (gma)  LOC101256217 (sly)  LOC103830664 (bra)  LOC112324124 (ppo)  LOC123088640 (tae)  LOC123148994 (tae)  LOC123164622 (tae)  LOC123413444 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_190394.3)
Subcellular
localization
TargetP
chlo 8  (predict for NP_190394.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
Genes directly connected with EDD1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.0 AT4G33760 tRNA synthetase class II (D, K and N) family protein [detail] 829518
10.4 TIC110 translocon at the inner envelope membrane of chloroplasts 110 [detail] 837205
10.0 EMB2247 protein EMBRYO DEFECTIVE 2247 [detail] 831533
9.6 emb2004 RNI-like superfamily protein [detail] 837591
8.3 OVA5 Lysyl-tRNA synthetase, class II [detail] 820551
7.6 OEP80 outer envelope protein of 80 kDa [detail] 832082
6.6 AT5G04710 Zn-dependent exopeptidases superfamily protein [detail] 830349
4.5 SRF1 STRUBBELIG-receptor family 1 [detail] 816618
Coexpressed
gene list		 [Coexpressed gene list for EDD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252404_at
252404_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252404_at
252404_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252404_at
252404_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823966      
Refseq ID (protein) NP_190394.3 


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