[←][→] ath   At3g48500 Gene
functional annotation
Function   Nucleic acid-binding, OB-fold-like protein      
GO BP
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (9 genes)  IEA  
GO:0042644 [list] [network] chloroplast nucleoid  (43 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1729 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001078259.1  NP_190419.3 
BLAST NP_001078259.1  NP_190419.3 
Orthologous [Ortholog page] CIP5 (sly)  LOC4325010 (osa)  LOC7463104 (ppo)  LOC25489495 (mtr)  LOC100775818 (gma)  LOC100783002 (gma)  LOC103874673 (bra)  LOC123057072 (tae)  LOC123067688 (tae)  LOC123080016 (tae)  LOC123442022 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 2,  cysk_nucl 1,  mito 1  (predict for NP_001078259.1)
chlo 9,  nucl 1  (predict for NP_190419.3)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001078259.1)
chlo 7  (predict for NP_190419.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PDE312 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.2 FLN2 fructokinase-like protein [detail] 843251
17.0 FLN1 fructokinase-like 1 [detail] 824576
16.6 PTAC12 plastid transcriptionally active 12 [detail] 818029
13.8 RAP RAP [detail] 817747
13.4 RFC3 Translation elongation factor EF1B/ribosomal protein S6 family protein [detail] 820974
12.2 MRL7-L Thioredoxin superfamily protein [detail] 817741
12.0 emb2738 GTP-binding family protein [detail] 820382
11.5 RH39 RH39 [detail] 826559
10.6 PTAC14 plastid transcriptionally active 14 [detail] 827759
10.5 PTAC3 plastid transcriptionally active 3 [detail] 819581
10.1 emb1703 embryo defective 1703 [detail] 825351
9.4 NOA1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 823899
8.9 OSB3 organellar single-stranded DNA binding protein 3 [detail] 834508
Coexpressed
gene list		 [Coexpressed gene list for PDE312]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252362_at
252362_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252362_at
252362_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252362_at
252362_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824009      
Refseq ID (protein) NP_001078259.1 
NP_190419.3 


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