[←][→] ath   At3g48550 Gene
functional annotation
Function   SHOOT GRAVITROPISM-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009630 [list] [network] gravitropism  (103 genes)  IEA  
GO:0009606 [list] [network] tropism  (158 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001325628.1  NP_190424.1 
BLAST NP_001325628.1  NP_190424.1 
Orthologous [Ortholog page] LOC4329440 (osa)  LOC7454557 (ppo)  LOC7454719 (ppo)  LOC11415627 (mtr)  LOC100775486 (gma)  LOC100819947 (gma)  LOC101251460 (sly)  LOC103873132 (bra)  LOC103874724 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  golg 1  (predict for NP_001325628.1)
nucl 10  (predict for NP_190424.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001325628.1)
other 5,  chlo 3  (predict for NP_190424.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
Genes directly connected with AT3G48550 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 SGR5 C2H2-like zinc finger protein [detail] 814725
6.8 PRA1.F1 prenylated RAB acceptor 1.F1 [detail] 838346
6.6 AT1G52190 Major facilitator superfamily protein [detail] 841649
6.3 AT1G60060 Serine/threonine-protein kinase WNK (With No Lysine)-like protein [detail] 842300
5.3 ATHB13 Homeobox-leucine zipper protein family [detail] 843314
5.1 AT5G49800 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 835043
4.7 ADF9 actin depolymerizing factor 9 [detail] 829649
4.0 AT3G08660 Phototropic-responsive NPH3 family protein [detail] 820013
Coexpressed
gene list		 [Coexpressed gene list for AT3G48550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252322_at
252322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252322_at
252322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252322_at
252322_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824014      
Refseq ID (protein) NP_001325628.1 
NP_190424.1 


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