[][] ath   AT3G48550 Gene
functional annotation
Function   SHOOT GRAVITROPISM-like protein
GO BP
GO:0009630 [list] [network] gravitropism  (90 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
KEGG
Protein NP_001325628.1  NP_190424.1 
BLAST NP_001325628.1  NP_190424.1 
Orthologous [Ortholog page] LOC7454557 (ppo)LOC11415627 (mtr)LOC100242196 (vvi)LOC100775486 (gma)LOC100819947 (gma)LOC101251460 (sly)LOC103873132 (bra)LOC103874724 (bra)
Subcellular
localization
wolf
nucl 9,  cyto 1,  golg 1  (predict for NP_001325628.1)
nucl 10  (predict for NP_190424.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001325628.1)
other 5,  chlo 3  (predict for NP_190424.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G48550 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.1 SGR5 C2H2-like zinc finger protein [detail] 814725
6.4 PRA1.F1 prenylated RAB acceptor 1.F1 [detail] 838346
6.2 AT1G60060 Serine/threonine-protein kinase WNK (With No Lysine)-like protein [detail] 842300
4.6 AT5G49800 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 835043
4.1 IDD16 indeterminate(ID)-domain 16 [detail] 839108
Coexpressed
gene list
[Coexpressed gene list for AT3G48550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252322_at
252322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252322_at
252322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252322_at
252322_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824014    
Refseq ID (protein) NP_001325628.1 
NP_190424.1 


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