[←][→] ath   AT3G48710 Gene
functional annotation
Function   DEK domain-containing chromatin associated protein  
GO BP
GO:2000779 [list] [network] regulation of double-strand break repair  (12 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0042393 [list] [network] histone binding  (72 genes)  IBA  
KEGG
Protein NP_190440.1 
BLAST NP_190440.1 
Orthologous [Ortholog page] AT4G26630 (ath)  AT5G55660 (ath)  AT5G63550 (ath)  LOC4327229 (osa)  LOC4333378 (osa)  LOC7471874 (ppo)  LOC11423522 (mtr)  LOC11435067 (mtr)  LOC25489146 (mtr)  LOC100245819 (vvi)  LOC100249691 (vvi)  LOC100281533 (zma)  LOC100779284 (gma)  LOC100785644 (gma)  LOC100788998 (gma)  LOC100812080 (gma)  LOC100812631 (gma)  LOC100813123 (gma)  LOC100817467 (gma)  LOC100818537 (gma)  LOC101249339 (sly)  LOC101250613 (sly)  LOC101254244 (sly)  LOC101264938 (sly)  LOC103626062 (zma)  LOC103643665 (zma)  LOC103650830 (zma)  LOC103834839 (bra)  LOC103837477 (bra)  LOC103845017 (bra)  LOC103851868 (bra)  LOC103866403 (bra)  LOC103873519 (bra)  LOC103873766 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_190440.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190440.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT3G48710 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 AT4G08310 DNA ligase [detail] 826385
8.3 AT2G16860 GCIP-interacting family protein [detail] 816187
7.8 AT4G15030 folate-sensitive fragile site protein [detail] 827162
6.5 AT1G58025 DNA-binding bromodomain-containing protein [detail] 842169
6.5 GTE6 general transcription factor group E6 [detail] 824393
5.3 AT2G26470 embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein [detail] 817188
4.7 AT2G19260 RING/FYVE/PHD zinc finger superfamily protein [detail] 816443
Coexpressed
gene list		 [Coexpressed gene list for AT3G48710]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252319_at
252319_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252319_at
252319_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252319_at
252319_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824032      
Refseq ID (protein) NP_190440.1 


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