[][] ath   AT3G48930 Gene
functional annotation
Function   Nucleic acid-binding, OB-fold-like protein
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (110 genes)  IBA IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0019843 [list] [network] rRNA binding  (99 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_190462.1 
BLAST NP_190462.1 
Orthologous [Ortholog page] LOC542552 (zma)RPS11 (gma)AT4G30800 (ath)RPS11-BETA (ath)LOC4336317 (osa)LOC4336975 (osa)LOC4336976 (osa)LOC4343620 (osa)LOC4344935 (osa)LOC7483812 (ppo)LOC7489484 (ppo)LOC9271697 (osa)LOC11408171 (mtr)LOC11420369 (mtr)LOC11446689 (mtr)LOC100244095 (vvi)LOC100265421 (vvi)LOC100280559 (zma)LOC100500094 (gma)LOC100500186 (gma)LOC100784140 (gma)LOC101249995 (sly)LOC101265738 (sly)LOC101266035 (sly)LOC103854885 (bra)LOC103865640 (bra)LOC103874241 (bra)LOC103874947 (bra)LOC110485086 (zma)
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for NP_190462.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190462.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
Genes directly connected with EMB1080 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
14.8 AT4G15000 Ribosomal L27e protein family [detail] 827159
14.4 AT3G23390 Zinc-binding ribosomal protein family protein [detail] 821920
14.2 RPS15 cytosolic ribosomal protein S15 [detail] 839564
14.1 AT5G02960 Ribosomal protein S12/S23 family protein [detail] 831724
13.9 AT1G34030 Ribosomal protein S13/S18 family [detail] 840300
12.4 AT1G77940 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 844129
12.0 AT3G52580 Ribosomal protein S11 family protein [detail] 824424
12.0 RPL16B ribosomal protein L16B [detail] 827607
Coexpressed
gene list
[Coexpressed gene list for EMB1080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252297_at
252297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252297_at
252297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252297_at
252297_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824054    
Refseq ID (protein) NP_190462.1 


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