[←][→] ath   At3g48930 Gene
functional annotation
Function   Nucleic acid-binding, OB-fold-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  NAS  
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_190462.1 
BLAST NP_190462.1 
Orthologous [Ortholog page] RPS11 (gma)  AT4G30800 (ath)  RPS11-BETA (ath)  LOC4336317 (osa)  LOC4336975 (osa)  LOC4336976 (osa)  LOC4343620 (osa)  LOC4344935 (osa)  LOC7483812 (ppo)  LOC7489484 (ppo)  LOC9271697 (osa)  LOC11408171 (mtr)  LOC11420369 (mtr)  LOC11446689 (mtr)  LOC18105113 (ppo)  LOC100500094 (gma)  LOC100500186 (gma)  LOC100784140 (gma)  LOC101249995 (sly)  LOC101265738 (sly)  LOC101266035 (sly)  LOC103854885 (bra)  LOC103865640 (bra)  LOC103874241 (bra)  LOC103874947 (bra)  LOC123046457 (tae)  LOC123054306 (tae)  LOC123134230 (tae)  LOC123144808 (tae)  LOC123190193 (tae)  LOC123403960 (hvu)  LOC123427621 (hvu) 
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for NP_190462.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190462.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
Genes directly connected with EMB1080 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.3 AT4G15000 Ribosomal L27e protein family [detail] 827159
16.0 AT3G23390 Zinc-binding ribosomal protein family protein [detail] 821920
15.9 RPS15 cytosolic ribosomal protein S15 [detail] 839564
15.8 AT5G27850 Ribosomal protein L18e/L15 superfamily protein [detail] 832848
15.4 AT4G18100 Ribosomal protein L32e [detail] 827535
15.3 PGY1 Ribosomal protein L1p/L10e family [detail] 817299
15.1 AT1G34030 Ribosomal protein S13/S18 family [detail] 840300
15.0 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 817766
13.9 AT1G77940 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 844129
13.9 AT5G45775 Ribosomal L5P family protein [detail] 834617
13.7 RLK902 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 821405
13.7 AT3G52580 Ribosomal protein S11 family protein [detail] 824424
11.7 AT5G02610 Ribosomal L29 family protein [detail] 831853
Coexpressed
gene list		 [Coexpressed gene list for EMB1080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252297_at
252297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252297_at
252297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252297_at
252297_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824054      
Refseq ID (protein) NP_190462.1 


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