[←][→] ath   At3g48990 Gene
functional annotation
Function   AMP-dependent synthetase and ligase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0033611 [list] [network] oxalate catabolic process  (1 genes)  IDA  
GO:0010030 [list] [network] positive regulation of seed germination  (23 genes)  IMP  
GO:0010214 [list] [network] seed coat development  (54 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IMP  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0050203 [list] [network] oxalate-CoA ligase activity  (1 genes)  IDA  
KEGG ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
Protein NP_190468.1 
BLAST NP_190468.1 
Orthologous [Ortholog page] LOC4337447 (osa)  LOC7474048 (ppo)  LOC7479322 (ppo)  LOC11407788 (mtr)  LOC100779306 (gma)  LOC100783685 (gma)  LOC100817853 (gma)  LOC101251259 (sly)  LOC101265548 (sly)  LOC103873097 (bra)  LOC123047502 (tae)  LOC123055296 (tae)  LOC123191122 (tae)  LOC123428485 (hvu) 
Subcellular
localization
wolf
cyto 4,  plas 2,  cyto_nucl 2,  mito 1,  E.R. 1  (predict for NP_190468.1)
Subcellular
localization
TargetP
other 7  (predict for NP_190468.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 2
ath01200 Carbon metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
Genes directly connected with AAE3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT5G39590 TLD-domain containing nucleolar protein [detail] 833955
8.1 CIPK3 CBL-interacting protein kinase 3 [detail] 817240
7.3 FDH formate dehydrogenase [detail] 831330
7.3 SAG21 senescence-associated gene 21 [detail] 828053
6.3 TDT tonoplast dicarboxylate transporter [detail] 834806
5.7 AT1G70780 uncharacterized protein [detail] 843415
Coexpressed
gene list		 [Coexpressed gene list for AAE3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252293_at
252293_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252293_at
252293_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252293_at
252293_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824060      
Refseq ID (protein) NP_190468.1 


The preparation time of this page was 0.2 [sec].