[←][→] ath   At3g50080 Gene
functional annotation
Function   VIER F-box protein 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  TAS  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  ISS  
KEGG
Protein NP_566928.1 
BLAST NP_566928.1 
Orthologous [Ortholog page] VFB3 (ath)  SKIP2 (ath)  VFB1 (ath)  LOC4346401 (osa)  LOC7462590 (ppo)  LOC7472683 (ppo)  LOC7476400 (ppo)  LOC11420387 (mtr)  LOC18104843 (ppo)  LOC100779319 (gma)  LOC100788163 (gma)  LOC100802150 (gma)  LOC100806231 (gma)  LOC100807711 (gma)  LOC100817022 (gma)  LOC101245757 (sly)  LOC101246998 (sly)  LOC101247773 (sly)  LOC103827866 (bra)  LOC103829524 (bra)  LOC103837742 (bra)  LOC103868721 (bra)  LOC112421285 (mtr)  LOC123103293 (tae)  LOC123111486 (tae)  LOC123120677 (tae)  LOC123452403 (hvu) 
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  chlo 2,  nucl 1  (predict for NP_566928.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566928.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VFB2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.9 AT5G28040 DNA-binding storekeeper protein-related transcriptional regulator [detail] 832874
8.9 AT2G17030 F-box SKIP23-like protein (DUF295) [detail] 816206
8.4 MOS2 D111/G-patch domain-containing protein [detail] 840246
7.4 AT5G49610 F-box family protein [detail] 835023
7.4 AT5G60820 RING/U-box superfamily protein [detail] 836203
7.0 AT3G24070 Zinc knuckle (CCHC-type) family protein [detail] 821993
6.9 AT5G08139 RING/U-box superfamily protein [detail] 830709
6.8 FBX2 F-box protein 2 [detail] 832228
6.8 AT2G37035 uncharacterized protein [detail] 818279
6.7 AT5G15820 RING/U-box superfamily protein [detail] 831439
6.5 SKIP2 SKP1/ASK1-interacting protein 2 [detail] 836860
6.4 AT3G51940 oxidoreductase/transition metal ion-binding protein [detail] 824357
5.6 AT3G26000 Ribonuclease inhibitor [detail] 822197
5.3 AT5G38600 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein [detail] 833850
Coexpressed
gene list		 [Coexpressed gene list for VFB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252242_at
252242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252242_at
252242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252242_at
252242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824170      
Refseq ID (protein) NP_566928.1 


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