[][] ath   AT3G50410 Gene
functional annotation
Function   OBF binding protein 1
GO BP
GO:0045787 [list] [network] positive regulation of cell cycle  (36 genes)  IMP  
GO:0042545 [list] [network] cell wall modification  (176 genes)  IMP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IEP  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IDA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_190610.1 
BLAST NP_190610.1 
Orthologous [Ortholog page] LOC778095 (gma)LOC778099 (gma)AT5G66940 (ath)LOC7480490 (ppo)LOC7483143 (ppo)LOC25501671 (mtr)LOC100254056 (vvi)LOC100272945 (zma)LOC100855283 (vvi)LOC101255352 (sly)LOC101260606 (sly)LOC101264214 (sly)LOC103828014 (bra)LOC103829551 (bra)LOC103837723 (bra)LOC103840954 (bra)LOC103860654 (bra)LOC104878796 (vvi)LOC107281590 (osa)LOC107325937 (zma)LOC109943943 (zma)
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  extr 1  (predict for NP_190610.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190610.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with OBP1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.0 AT2G41130 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 818712
5.9 AT5G66940 Dof-type zinc finger DNA-binding family protein [detail] 836828
5.4 TMO6 TARGET OF MONOPTEROS 6 [detail] 836142
5.0 ERF12 ERF domain protein 12 [detail] 839732
4.6 OFP7 ovate family protein 7 [detail] 816365
Coexpressed
gene list
[Coexpressed gene list for OBP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252210_at
252210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252210_at
252210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
252210_at
252210_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 824205    
Refseq ID (protein) NP_190610.1 


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